RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FKBP14Q9NWM8 211 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 TNS2Q63HR2 1409 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 A0A0G2JPF8 293 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 HNRNPCL3B7ZW38 293 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 CLDN25C9JDP6 229 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 BLOC1S5-TXNDC5H3BN57 136 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 HNRNPCL4P0DMR1 293 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 HK1P19367 917 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 RPS12P25398 132 aaKnown RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 HTR1BP28222 390 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 TIE1P35590 1138 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 ANKDD1AQ495B1 522 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 RUNDC3AQ59EK9 446 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 BRMS1LQ5PSV4 323 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 UBE2E3Q969T4 207 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 C12orf66Q96MD2 445 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 SLC35A5Q9BS91 424 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 CSTF2P33240 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP38-201ENST00000307017 MAP3K8P41279 467 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 SLC26A2P50443 739 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 GDF6Q6KF10 455 aaPredicted RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 SUSD1Q6UWL2 747 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 LRRC69Q6ZNQ3 347 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 YIPF7Q8N8F6 280 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 SRFBP1Q8NEF9 429 aaKnown RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 C7orf34Q96L11 122 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
USP38-201ENST00000307017 CDH7Q9ULB5 785 aa12.39□□□□□ -0.43
USP38-201ENST00000307017 MAFO75444 373 aaPredicted RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 PRPF38BQ5VTL8 546 aaKnown RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 DCAF12L1Q5VU92 463 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 SDR16C5Q8N3Y7 309 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 ZFP41Q8N8Y5 198 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 THAP3Q8WTV1 239 aaPredicted RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 SAV1Q9H4B6 383 aaPredicted RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 MAN2C1Q9NTJ4 1040 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 FZD4Q9ULV1 537 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 CLDN4O14493 209 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 RHDQ02161 417 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 EDARQ9UNE0 448 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 PADI2Q9Y2J8 665 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 GXYLT2A0PJZ3 443 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 L7N2F9 121 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 KCNJ13O60928 360 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 ZNF823P16415 610 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 VAMP2P63027 116 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 MOGSQ13724 837 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 TCEAL6Q6IPX3 200 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 NLGN4XQ8N0W4 816 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 OR2AJ1Q8NGZ0 328 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 SGCDQ92629 289 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 LGR4Q9BXB1 951 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 NOP16Q9Y3C1 178 aaKnown RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 DIP2AQ14689 1571 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 VILLO15195 856 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 SORBS2O94875 1100 aaKnown RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 SOX30O94993 753 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 CD47Q08722 323 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 GRK1Q15835 563 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 TTLL10Q6ZVT0 673 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 BBS12Q6ZW61 710 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 ADGRD2Q7Z7M1 963 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 AADATQ8N5Z0 425 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 KLHL6Q8WZ60 621 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 SLC35G5Q96KT7 338 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 XPNPEP1Q9NQW7 623 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 GDAP2Q9NXN4 497 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 HYKKA2RU49 373 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 H7C0S8 307 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 ACOX3O15254 700 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 HSD11B1P28845 292 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 AQP11Q8NBQ7 271 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 INO80EQ8NBZ0 244 aaPredicted RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 GTF3C2Q8WUA4 911 aaPredicted RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 STON2Q8WXE9 905 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 EFHD2Q96C19 240 aaPredicted RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 POT1Q9NUX5 634 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 IFT80Q9P2H3 777 aaPredicted RBP12.38□□□□□ -0.43
USP38-201ENST00000307017 TMEM98Q9Y2Y6 226 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 ALG5Q9Y673 324 aa12.38□□□□□ -0.43
USP38-201ENST00000307017 C12orf71A8MTZ7 269 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 NDUFS4O43181 175 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 WFS1O76024 890 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 CHRNB2P17787 502 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 PTGIRP43119 386 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 OR3A3P47888 321 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 OR3A2P47893 321 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 RBM39Q14498 530 aaKnown RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 LYPLAL1Q5VWZ2 237 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 MEX3DQ86XN8 651 aaKnown RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 DEFB118Q96PH6 123 aa12.37□□□□□ -0.43
USP38-201ENST00000307017 C7orf50Q9BRJ6 194 aaKnown RBP12.37□□□□□ -0.43
USP38-201ENST00000307017 TCAF1Q9Y4C2 921 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms