RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 D2HGDHQ8N465 521 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 LINC01555Q8NAE3 123 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 HMGCLL1Q8TB92 370 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DENND1AQ8TEH3 1009 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC44A1Q8WWI5 657 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SMPDL3AQ92484 453 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FGF11Q92914 225 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PDLIM5Q96HC4 596 aaKnown RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CNTNAP3BQ96NU0 1288 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCDC77Q9BR77 488 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC12A9Q9BXP2 914 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PITPNM3Q9BZ71 974 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CNTNAP3Q9BZ76 1288 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 B3GNT4Q9C0J1 378 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DERL2Q9GZP9 239 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ASCL3Q9NQ33 180 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCDC177Q9NQR7 707 aaPredicted RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FBXO8Q9NRD0 319 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ABCF3Q9NUQ8 709 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 WDR70Q9NW82 654 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SIDT1Q9NXL6 827 aaKnown RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ARL15Q9NXU5 204 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CTNNAL1Q9UBT7 734 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ADAMTS6Q9UKP5 1117 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RARRES3Q9UL19 164 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 BTRCQ9Y297 605 aa10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 V9GYY5 206 aaPredicted RBP10.62□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 A0A087X1B8 175 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 C9orf172C9J069 976 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 STMND1H3BQB6 276 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RRP8O43159 456 aaKnown RBP10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KRT38O76015 456 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TSPAN12O95859 305 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCDC166P0CW27 439 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MYBL2P10244 700 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PVRP15151 417 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CCND1P24385 295 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 IMPA1P29218 277 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TYK2P29597 1187 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ATP6V0D1P61421 351 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 VSNL1P62760 191 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SH3BP2P78314 561 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FASTKQ14296 549 aaKnown RBP10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CSHL1Q14406 222 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 IL11RAQ14626 422 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KCNAB1Q14722 419 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZKSCAN8Q15776 578 aaPredicted RBP10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 LGSNQ5TDP6 509 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SUSD1Q6UWL2 747 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TMEM207Q6UWW9 146 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 LRRC69Q6ZNQ3 347 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CMC1Q7Z7K0 106 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PROSER1Q86XN7 944 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CNPY4Q8N129 248 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 BMPERQ8N8U9 685 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PPFIBP2Q8ND30 876 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZNF248Q8NDW4 579 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 OR8K5Q8NH50 307 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SNIP1Q8TAD8 396 aaKnown RBP10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KCNE4Q8WWG9 221 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ATL1Q8WXF7 558 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ANKRD7Q92527 254 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MED8Q96G25 268 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TCTN2Q96GX1 697 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PPM1MQ96MI6 270 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TSNARE1Q96NA8 513 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DCBLD2Q96PD2 775 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TRAPPC9Q96Q05 1148 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MIPEPQ99797 713 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CTRCQ99895 268 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 EGFL8Q99944 293 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ACAT2Q9BWD1 397 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KLHL25Q9H0H3 589 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FGF21Q9NSA1 209 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 IRAK4Q9NWZ3 460 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 UTP6Q9NYH9 597 aaKnown RBP10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FOXJ2Q9P0K8 574 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 STOX2Q9P2F5 926 aaPredicted RBP10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TLK1Q9UKI8 766 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NOVA2Q9UNW9 492 aaKnown RBP10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PDE10AQ9Y233 779 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PCDHGA3Q9Y5H0 932 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 B3GALT1Q9Y5Z6 326 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NCOR2Q9Y618 2525 aa10.61□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TMEM150CB9EJG8 249 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CDC7O00311 574 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KRT37O76014 449 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 GUCA1CO95843 209 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 S100BP04271 92 aaPredicted RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ANXA5P08758 320 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FOLR1P15328 257 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MAGP20916 626 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PSMB5P28074 263 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TBPL1P62380 186 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC29A2Q14542 456 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TSNQ15631 228 aaKnown RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 GPR19Q15760 415 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms