RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 NAE1Q13564 534 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 TSTA3Q13630 321 aaPredicted RBP26.26■■□□□ 1.79
HDAC3-201ENST00000305264 HMGCLL1Q8TB92 370 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 MED8Q96G25 268 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 SPHK1Q9NYA1 384 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 MID2Q9UJV3 735 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 IGHV1OR21-1A0A087WYE8 117 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 B4GAT1O43505 415 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 CHRM5P08912 532 aaPredicted RBP26.26■■□□□ 1.79
HDAC3-201ENST00000305264 DHRS4L1P0CG22 281 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 PEBP1P30086 187 aaKnown RBP26.26■■□□□ 1.79
HDAC3-201ENST00000305264 HSD17B2P37059 387 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 SLC6A12P48065 614 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 WDR4P57081 412 aaKnown RBP26.26■■□□□ 1.79
HDAC3-201ENST00000305264 PTCHD3Q3KNS1 767 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 NKAIN2Q5VXU1 208 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 C10orf107Q8IVU9 208 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 TCAIMQ8N3R3 496 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 UBTD2Q8WUN7 234 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 CCDC3Q9BQI4 270 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 ABCF3Q9NUQ8 709 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 NKIRAS1Q9NYS0 192 aa26.26■■□□□ 1.79
HDAC3-201ENST00000305264 SNRNP200O75643 2136 aaKnown RBP26.25■■□□□ 1.79
HDAC3-201ENST00000305264 CEP250Q9BV73 2442 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 CFAP54Q96N23 3096 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 FAM221BA6H8Z2 402 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 IPO13O94829 963 aaKnown RBP26.25■■□□□ 1.79
HDAC3-201ENST00000305264 CAPZBP47756 277 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 SERPINB4P48594 390 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 OR56A3Q8NH54 315 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 ACSS2Q9NR19 701 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 EVA1BQ9NVM1 165 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 TMCO1Q9UM00 188 aa26.25■■□□□ 1.79
HDAC3-201ENST00000305264 UNC13CQ8NB66 2214 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 A0A1W2PPV9 198 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 OR5K3A6NET4 321 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 PROS1P07225 676 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 POLR2CP19387 275 aaPredicted RBP26.24■■□□□ 1.79
HDAC3-201ENST00000305264 ACP1P24666 158 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 PSMB5P28074 263 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 GGT5P36269 586 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 SMPDL3AQ92484 453 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 TMEM237Q96Q45 408 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 TWSG1Q9GZX9 223 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 OXSMQ9NWU1 459 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 PCM1Q15154 2024 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 ZNF839A8K0R7 811 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 AMD1P17707 334 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 ALDH3A1P30838 453 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 PPP1CAP62136 330 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 AMZ1Q400G9 498 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 OOSP2Q86WS3 158 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 MOCOSQ96EN8 888 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 PAIP2Q9BPZ3 127 aaKnown RBP26.24■■□□□ 1.79
HDAC3-201ENST00000305264 CCDC177Q9NQR7 707 aaPredicted RBP26.24■■□□□ 1.79
HDAC3-201ENST00000305264 INTS7Q9NVH2 962 aaKnown RBP26.24■■□□□ 1.79
HDAC3-201ENST00000305264 HRASLS2Q9NWW9 162 aa26.24■■□□□ 1.79
HDAC3-201ENST00000305264 STX16-NPEPL1H3BU86 382 aa26.23■■□□□ 1.79
HDAC3-201ENST00000305264 STX16O14662 325 aa26.23■■□□□ 1.79
HDAC3-201ENST00000305264 EEF1DP29692 281 aaKnown RBP26.23■■□□□ 1.79
HDAC3-201ENST00000305264 PPM1FP49593 454 aaPredicted RBP26.23■■□□□ 1.79
HDAC3-201ENST00000305264 PRKAA2P54646 552 aa26.23■■□□□ 1.79
HDAC3-201ENST00000305264 NETO1Q8TDF5 533 aa26.23■■□□□ 1.79
HDAC3-201ENST00000305264 SGPP1Q9BX95 441 aa26.23■■□□□ 1.79
HDAC3-201ENST00000305264 CD244Q9BZW8 370 aa26.23■■□□□ 1.79
HDAC3-201ENST00000305264 CNOT10Q9H9A5 744 aaKnown RBP26.23■■□□□ 1.79
HDAC3-201ENST00000305264 GSAPA4D1B5 854 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 WDR91A4D1P6 747 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 PCNX2A6NKB5 2137 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 BPGMP07738 259 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 ACADVLP49748 655 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 HHATQ5VTY9 493 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 RPS27LQ71UM5 84 aaKnown RBP26.22■■□□□ 1.79
HDAC3-201ENST00000305264 SLC22A9Q8IVM8 553 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 CDC6Q99741 560 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 ACAT2Q9BWD1 397 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 SLC22A14Q9Y267 594 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 PIPSLA2A3N6 862 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 CCNT2O60583 730 aaKnown RBP26.22■■□□□ 1.79
HDAC3-201ENST00000305264 STK16O75716 305 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 WDR47O94967 919 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 GPLD1P80108 840 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 CAPN13Q6MZZ7 669 aaPredicted RBP26.22■■□□□ 1.79
HDAC3-201ENST00000305264 DEFB124Q8NES8 71 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 AHCYL2Q96HN2 611 aaKnown RBP26.22■■□□□ 1.79
HDAC3-201ENST00000305264 OR4K3Q96R72 315 aa26.22■■□□□ 1.79
HDAC3-201ENST00000305264 TNFSF14O43557 240 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 PRICKLE3O43900 615 aaPredicted RBP26.21■■□□□ 1.79
HDAC3-201ENST00000305264 CHN1P15882 459 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 CD1CP29017 333 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 CSF2RBP32927 897 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 HERVK_113P63132 956 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 PCBP2Q15366 365 aaKnown RBP eCLIP26.21■■□□□ 1.79
HDAC3-201ENST00000305264 LIPMQ5VYY2 423 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 KLHL35Q6PF15 583 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 KLHDC8AQ8IYD2 350 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 FLVCR1-AS1Q8TAF5 88 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 CCDC126Q96EE4 140 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 ERVK-6Q9BXR3 956 aa26.21■■□□□ 1.79
HDAC3-201ENST00000305264 PITPNM3Q9BZ71 974 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms