RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 COL1A2P08123 1366 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 STX7O15400 261 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 RGS14O43566 566 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CSF2P04141 144 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 NTRK1P04629 796 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 TNFRSF1BP20333 461 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SLC15A1P46059 708 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 PPP3CCP48454 512 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 ARMCX4Q5H9R4 360 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 FAM209AQ5JX71 171 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 PTRHD1Q6GMV3 140 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 FBXL22Q6P050 247 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CADM2Q8N3J6 435 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 TRNT1Q96Q11 434 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CDADC1Q9BWV3 514 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 TIGARQ9NQ88 270 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 OGDHLQ9ULD0 1010 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 KLHL20Q9Y2M5 609 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 A0A0D9SEW6 157 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 PABPN1LA6NDY0 278 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 A8MX80 341 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 ARNTLO00327 626 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 STX16O14662 325 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 HAT1O14929 419 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 PTTG1O95997 202 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 IFI30P13284 250 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 ARHGEF7Q14155 803 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CYP27C1Q4G0S4 372 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 KIAA1614Q5VZ46 1190 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SHQ1Q6PI26 577 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 PRSS48Q7RTY5 328 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 KLHDC8BQ8IXV7 354 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CDCA5Q96FF9 252 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CLSTN3Q9BQT9 956 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 ATP13A1Q9HD20 1204 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 RPRD1BQ9NQG5 326 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SIRT5Q9NXA8 310 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 GPRC5BQ9NZH0 403 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SCN4AP35499 1836 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 OR7A17O14581 309 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 DSCR3O14972 297 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 RPLP0P05388 317 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SLC10A3P09131 477 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 HLA-DPA1P20036 260 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 OGNP20774 298 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 POU1F1P28069 291 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 GNPDA1P46926 289 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SMARCB1Q12824 385 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 OVOS1Q6IE37 1185 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 NEK10Q6ZWH5 1172 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 GPR149Q86SP6 731 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CCDC71Q8IV32 467 aaPredicted RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 RGL4Q8IZJ4 473 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 TMEM132CQ8N3T6 1108 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SPPL2AQ8TCT8 520 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 EBPLQ9BY08 206 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 CCNB1IP1Q9NPC3 277 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 THUMPD1Q9NXG2 353 aaKnown RBP14.31□□□□□ -0.12
COL6A2-201ENST00000300527 NEUROG3Q9Y4Z2 214 aa14.31□□□□□ -0.12
COL6A2-201ENST00000300527 SSC5DA1L4H1 1573 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 RRN3P2A6NIE6 340 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 C2orf81A6NN90 581 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 RFXANKO14593 260 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 TUFMP49411 452 aaKnown RBP14.3□□□□□ -0.12
COL6A2-201ENST00000300527 MXD1Q05195 221 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 CLPPQ16740 277 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-201ENST00000300527 SLC39A12Q504Y0 691 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 RUNDC3AQ59EK9 446 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 MS4A13Q5J8X5 152 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 MANEALQ5VSG8 457 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 FAM171A1Q5VUB5 890 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF544Q6NX49 715 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 PNCKQ6P2M8 343 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 TMEM86AQ8N2M4 240 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 CLDN19Q8N6F1 224 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 EGLN2Q96KS0 407 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 TAS2R9Q9NYW1 312 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 SBF1O95248 1867 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 EVPLLA8MZ36 301 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 M0R082 166 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 EIF3FO00303 357 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-201ENST00000300527 OTCP00480 354 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 FABP3P05413 133 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 ODC1P11926 461 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 PTPN2P17706 415 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 RGRP47804 291 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 IL18R1Q13478 541 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 C10orf120Q5SQS8 335 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 OR4F3Q6IEY1 312 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 AFTPHQ6ULP2 937 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 IL17RDQ8NFM7 739 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 KBTBD8Q8NFY9 601 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF675Q8TD23 568 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 CD200R1Q8TD46 325 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 RTP3Q9BQQ7 232 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 OR2B2Q9GZK3 357 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 DKK3Q9UBP4 350 aa14.3□□□□□ -0.12
COL6A2-201ENST00000300527 TNFRSF10AO00220 468 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 ANKRD28O15084 1053 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms