RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 TACR1P25103 407 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 MAP4P27816 1152 aaKnown RBP19.44■□□□□ 0.7
CXCL16-201ENST00000293778 HOXA9P31269 272 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 CAPGP40121 348 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 SH3BGRP55822 239 aaPredicted RBP19.44■□□□□ 0.7
CXCL16-201ENST00000293778 TUBA4AP68366 448 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 LSAMPQ13449 338 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 SYTL3Q4VX76 610 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 LRIF1Q5T3J3 769 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 TMEM214Q6NUQ4 689 aaKnown RBP19.44■□□□□ 0.7
CXCL16-201ENST00000293778 GRASPQ7Z6J2 395 aaPredicted RBP19.44■□□□□ 0.7
CXCL16-201ENST00000293778 FBXO30Q8TB52 745 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 FBXL20Q96IG2 436 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 RAD9AQ99638 391 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 OSBPL6Q9BZF3 934 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 RMND5AQ9H871 391 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 PTTG2Q9NZH5 202 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 LIMD1Q9UGP4 676 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 MAN2B2Q9Y2E5 1009 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 PCDHB14Q9Y5E9 798 aa19.44■□□□□ 0.7
CXCL16-201ENST00000293778 A0A096LPI6 279 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 C16orf96A6NNT2 1141 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 NPIPB8E9PQR5 432 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 SLC9A3R1O14745 358 aaPredicted RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 PRSS23O95084 383 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 SCELO95171 688 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 PCNAP12004 261 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ABRQ12979 859 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 KCNC3Q14003 757 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 CBX2Q14781 532 aaPredicted RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 CYBRD1Q53TN4 286 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 LDLRAP1Q5SW96 308 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ATG9BQ674R7 924 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 TBPL2Q6SJ96 375 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ENPP6Q6UWR7 440 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 GCNT7Q6ZNI0 430 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 TECPR1Q7Z6L1 1165 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 PHACTR4Q8IZ21 702 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 FAM86B1Q8N7N1 296 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 TESCQ96BS2 214 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ITCHQ96J02 903 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 LRIG1Q96JA1 1093 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 APOLD1Q96LR9 279 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 KAT8Q9H7Z6 458 aaKnown RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 CARS2Q9HA77 564 aaKnown RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 SERHLQ9NQF3 203 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 DKK3Q9UBP4 350 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 SERTM1A2A2V5 107 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ARHGEF33A8MVX0 844 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 UPK1AO00322 258 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 CXCR6O00574 342 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 TSPAN6O43657 245 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 SEC24DO94855 1032 aaPredicted RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 PCSK2P16519 638 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 RPL10P27635 214 aaKnown RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ALDH3B2P48448 385 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 CDH15P55291 814 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 IRF8Q02556 426 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 PGS1Q32NB8 556 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ZNF697Q5TEC3 545 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 NECAB2Q7Z6G3 386 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 MICU2Q8IYU8 434 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 ZNF366Q8N895 744 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 SP7Q8TDD2 431 aaPredicted RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 FAM162AQ96A26 154 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 CPPED1Q9BRF8 314 aaPredicted RBP19.43■□□□□ 0.7
CXCL16-201ENST00000293778 PPT2Q9UMR5 302 aa19.43■□□□□ 0.7
CXCL16-201ENST00000293778 NOTCH4Q99466 2003 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 PSIP1O75475 530 aaKnown RBP19.42■□□□□ 0.7
CXCL16-201ENST00000293778 SNAP29O95721 258 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 CLIC3O95833 236 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 HNRNPA1P09651 372 aaKnown RBP eCLIP19.42■□□□□ 0.7
CXCL16-201ENST00000293778 TCF3P15923 654 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 CEBPBP17676 345 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 AMD1P17707 334 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 MMP12P39900 470 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 DGKGP49619 791 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 CTSCP53634 463 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 DHCR24Q15392 516 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.42■□□□□ 0.7
CXCL16-201ENST00000293778 OTUD3Q5T2D3 398 aaPredicted RBP19.42■□□□□ 0.7
CXCL16-201ENST00000293778 B3GNT6Q6ZMB0 384 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 TMEM132CQ8N3T6 1108 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 RASGEF1AQ8N9B8 481 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 GLYATL1Q969I3 302 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 TMBIM1Q969X1 311 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 TMEM159Q96B96 161 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 VPS35Q96QK1 796 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 INPP5KQ9BT40 448 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 HPS4Q9NQG7 708 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 THEGQ9P2T0 379 aa19.42■□□□□ 0.7
CXCL16-201ENST00000293778 FAM220BPB1ANY3 271 aa19.41■□□□□ 0.7
CXCL16-201ENST00000293778 LRATO95237 230 aa19.41■□□□□ 0.7
CXCL16-201ENST00000293778 SRPRAP08240 638 aaKnown RBP19.41■□□□□ 0.7
CXCL16-201ENST00000293778 ELFN1P0C7U0 828 aa19.41■□□□□ 0.7
CXCL16-201ENST00000293778 ACPPP15309 386 aa19.41■□□□□ 0.7
CXCL16-201ENST00000293778 MTHFRP42898 656 aa19.41■□□□□ 0.7
CXCL16-201ENST00000293778 ACOX1Q15067 660 aa19.41■□□□□ 0.7
CXCL16-201ENST00000293778 LIPJQ5W064 366 aa19.41■□□□□ 0.7
CXCL16-201ENST00000293778 NOXRED1Q6NXP6 359 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms