RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SPATA22Q8NHS9 363 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 PAK1IP1Q9NWT1 392 aaPredicted RBP17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 PCDHGB7Q9Y5F8 929 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 GSTT2P0CG29 244 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 CSTF2P33240 577 aaKnown RBP eCLIP17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 BUD31P41223 144 aaPredicted RBP17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 IRF9Q00978 393 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 PITRM1Q5JRX3 1037 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 RHBDF1Q96CC6 855 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 TWNKQ96RR1 684 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 GPR88Q9GZN0 384 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 SGK2Q9HBY8 427 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 HSPB11Q9Y547 144 aa17.14■□□□□ 0.34
PCDHA13-201ENST00000289272 STT3AP46977 705 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 MANFP55145 182 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 SOWAHAQ2M3V2 549 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 AKIRIN2Q53H80 203 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 LCN8Q6JVE9 175 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 CYP4V2Q6ZWL3 525 aaPredicted RBP17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 SIGLEC10Q96LC7 697 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 ZNHIT2Q9UHR6 403 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 MEMO1Q9Y316 297 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 hCG_2039718K7EN88 272 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 PAPSS2O95340 614 aaPredicted RBP17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 NFATC1O95644 943 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 BTBD16Q32M84 506 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 PIGGQ5H8A4 983 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 RD3Q7Z3Z2 195 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 GLIS1Q8NBF1 620 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 NCSTNQ92542 709 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 INTS7Q9NVH2 962 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 NME6O75414 186 aaPredicted RBP17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 RNASEH2AO75792 299 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 IFNA6P05013 189 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 HSD17B1P14061 328 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 CLCN4P51793 760 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 BIKQ13323 160 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 MEAF6Q9HAF1 191 aa17.14■□□□□ 0.33
PCDHA13-201ENST00000289272 TLR4O00206 839 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 DHRS4L1P0CG22 281 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 CDK4P11802 303 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 IGFBP4P22692 258 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 IL10RBQ08334 325 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 TAF1AQ15573 450 aaPredicted RBP17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 MSS51Q4VC12 460 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 BEND7Q8N7W2 519 aaPredicted RBP17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 FUBP3Q96I24 572 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 SPATA9Q9BWV2 254 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 ST14Q9Y5Y6 855 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 TAF10Q12962 218 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 HEPACAMQ14CZ8 416 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 MEDAGQ5VYS4 303 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 HYLS1Q96M11 299 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 TAS2R9Q9NYW1 312 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 TESMINQ9Y4I5 508 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 LCN1P31025 176 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 NRG1Q02297 640 aaPredicted RBP17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 EMX2Q04743 252 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 TARBP2Q15633 366 aaKnown RBP17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 SYT16Q17RD7 645 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 RAET1GQ6H3X3 334 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 GPR153Q6NV75 609 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 DOK6Q6PKX4 331 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 DCDC5Q6ZRR9 648 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 GRIN3AQ8TCU5 1115 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 GPR152Q8TDT2 470 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 FOLH1BQ9HBA9 442 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 RBPJLQ9UBG7 517 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 COMMD3Q9UBI1 195 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 RGPD5Q99666 1765 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 CHP2O43745 196 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 RFX3P48380 749 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 ZNF486Q96H40 463 aaPredicted RBP17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 ACSS2Q9NR19 701 aa17.13■□□□□ 0.33
PCDHA13-201ENST00000289272 NFKBIEO00221 500 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 MEP1AQ16819 746 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 POMGNT2Q8NAT1 580 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 TMEM80Q96HE8 168 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 LMAN2LQ9H0V9 348 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 PCDHB9Q9Y5E1 797 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 YJEFN3A6XGL0 299 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 NT5C1B-RDH14C9J2C7 533 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 L7N2F9 121 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 S100GP29377 79 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 MXD1Q05195 221 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 ATG9BQ674R7 924 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 RPTNQ6XPR3 784 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 GALNT13Q8IUC8 556 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 PLD4Q96BZ4 506 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 CAPN10Q9HC96 672 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 GLS2Q9UI32 602 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 MYH8P13535 1937 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 LARS2Q15031 903 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 PHC2Q8IXK0 858 aa17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 SPIN1Q9Y657 262 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-201ENST00000289272 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms