RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 GSTO2Q9H4Y5 243 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 NOL11Q9H8H0 719 aaKnown RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 ECHDC1Q9NTX5 307 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 PAG1Q9NWQ8 432 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 FAM30AQ9NZY2 134 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 THEGQ9P2T0 379 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TESQ9UGI8 421 aaKnown RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 SNX7Q9UNH6 387 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC12A4Q9UP95 1085 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CMAHPQ9Y471 501 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.48□□□□□ -1.69
CD44-202ENST00000278385 AP4B1Q9Y6B7 739 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 A0A1B0GUL6 1792 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 PHLPP2Q6ZVD8 1323 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ADGRA2Q96PE1 1338 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ZNF532Q9HCE3 1301 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 A0A075B6Q4 140 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 A0A0U1RQS6 177 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 C13orf42A0A1B0GVH6 325 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 LNP1A1A4G5 178 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 TARSL2A2RTX5 802 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 LEFTY2O00292 366 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 PRRG1O14668 218 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 HS3ST1O14792 307 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 DCLK1O15075 740 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 NKX2-8O15522 239 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 SELENOFO60613 162 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 NCR1O76036 304 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 KAT7O95251 611 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 CXCL14O95715 111 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 GPANK1O95872 356 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 GH2P01242 217 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 IGHEP01854 428 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 CHRNA1P02708 482 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 TROVE2P10155 538 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD44-202ENST00000278385 LYL1P12980 280 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 HGFP14210 728 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 CPN2P22792 545 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 DDX6P26196 483 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD44-202ENST00000278385 TIA1P31483 386 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD44-202ENST00000278385 NUP62P37198 522 aaPredicted RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 CDKN1AP38936 164 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 MAGEA1P43355 309 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 GSTM5P46439 218 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 STARP49675 285 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 SERPINH1P50454 418 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 PLCD1P51178 756 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ARSEP51690 589 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 CLCN4P51793 760 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 DGKEP52429 567 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 EFNA5P52803 228 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 HMGCS2P54868 508 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 MFAP3P55082 362 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 FOXL2P58012 376 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 NOP14P78316 857 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 BLOC1S1P78537 153 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 GABPAQ06546 454 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 CDK18Q07002 472 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 PIGFQ07326 219 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ZNF844Q08AG5 666 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ACSM1Q08AH1 577 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 FHL2Q14192 279 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 LARS2Q15031 903 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 ACOX1Q15067 660 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 PTCHD3Q3KNS1 767 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 IFI44LQ53G44 452 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 RARS2Q5T160 578 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 TREML2Q5T2D2 321 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 RNASEH2BQ5TBB1 312 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 LIN9Q5TKA1 542 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 OR7E24Q6IFN5 339 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ZNF813Q6ZN06 617 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 LRRC55Q6ZSA7 311 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 NKAIN4Q8IVV8 208 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 SLC43A2Q8N370 569 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ANKRD13CQ8N6S4 541 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 SLC16A11Q8NCK7 471 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 OR56A1Q8NGH5 318 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 OR52J3Q8NH60 311 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 DNAJB14Q8TBM8 379 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 GPT2Q8TD30 523 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 HDAC7Q8WUI4 952 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 SLC20A1Q8WUM9 679 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 DNAJA4Q8WW22 397 aaPredicted RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 CKAP2Q8WWK9 683 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 SELENOMQ8WWX9 145 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 STARD8Q92502 1023 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 AZIN2Q96A70 460 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 EFHD2Q96C19 240 aaPredicted RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 ARHGEF26Q96DR7 871 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 C12orf42Q96LP6 360 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 QRFPRQ96P65 431 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 LRRC3BQ96PB8 259 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 KLHL5Q96PQ7 755 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 PCDHB18PQ96TA0 734 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 NEU1Q99519 415 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ASCL2Q99929 193 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 PIGQQ9BRB3 760 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms