RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SVOPQ8N4V2 548 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TEX26Q8N6G2 289 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 DNASE1L2Q92874 299 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 ZFYVE19Q96K21 471 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 KLHL25Q9H0H3 589 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TLR8Q9NR97 1041 aaKnown RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 OSGIN1Q9UJX0 560 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 INTS6Q9UL03 887 aaKnown RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TPRKBQ9Y3C4 175 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 SNX10Q9Y5X0 201 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 ST14Q9Y5Y6 855 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PMF1-BGLAPU3KQ54 211 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TICRRQ7Z2Z1 1910 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 A0A1W2PQH9 124 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 H3BMM5 538 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 GMNNO75496 209 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 INMTO95050 263 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 SLC2A3P11169 496 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 MSH3P20585 1137 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PCYT1AP49585 367 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 EMX1Q04741 257 aaPredicted RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 KCNAB2Q13303 367 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 CDK5R2Q13319 367 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 KEAP1Q14145 624 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 SELPLGQ14242 412 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 MEP1AQ16819 746 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 ADPRMQ3LIE5 342 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 HECTD3Q5T447 861 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PIWIL3Q7Z3Z3 882 aaKnown RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 IFNEQ86WN2 208 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 HIPK1Q86Z02 1210 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 FBXO39Q8N4B4 442 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 FBXL6Q8N531 539 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 RTL3Q8N8U3 475 aaKnown RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 DNAJB8Q8NHS0 232 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PROKR1Q8TCW9 393 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 SH3RF2Q8TEC5 729 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 RORBQ92753 470 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TEX37Q96LM6 180 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 HOXD1Q9GZZ0 328 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 INTS7Q9NVH2 962 aaKnown RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 NPAP1Q9NZP6 1156 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 GIMAP2Q9UG22 337 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 NEUROG3Q9Y4Z2 214 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PTGDR2Q9Y5Y4 395 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 LOC285095A0A1B0GVY8 99 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 IRAK2O43187 625 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 UPK1BO75841 260 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 CNTN5O94779 1100 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 NADKO95544 446 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 PTTG1O95997 202 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 GSNP06396 782 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TSPAN8P19075 237 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 SERPINB1P30740 379 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 RENBPP51606 427 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 MAPK10P53779 464 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TPD52P55327 224 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 MLF2Q15773 248 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 GEN1Q17RS7 908 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 PERM1Q5SV97 790 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 MRNIPQ6NTE8 343 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 UGT3A1Q6NUS8 523 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 P2RY8Q86VZ1 359 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 MMAAQ8IVH4 418 aaKnown RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 IRF7Q92985 503 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF583Q96ND8 569 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TMEM74Q96NL1 305 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF382Q96SR6 550 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 SLIRPQ9GZT3 109 aaKnown RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 NXF2Q9GZY0 626 aaKnown RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 MMP27Q9H306 513 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TPK1Q9H3S4 243 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 EHD1Q9H4M9 534 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TESMINQ9Y4I5 508 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 SHISA7A6NL88 538 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 E9PQ18 207 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 LEFTY2O00292 366 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 LDB2O43679 373 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TLR5O60602 858 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 SIX3O95343 332 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TBX18O95935 607 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 SLC35A2P78381 396 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 PFKFB4Q16877 469 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 C6orf136Q5SQH8 315 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 ADCK1Q86TW2 530 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 EID3Q8N140 333 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 UMODL1-AS1Q8N2C9 162 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 CARNMT1Q8N4J0 409 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF548Q8NEK5 533 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-201ENST00000276201 OR56A4Q8NGH8 313 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 C1orf74Q96LT6 269 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 SH3GL1Q99961 368 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 FAM83CQ9BQN1 747 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 TBC1D17Q9HA65 648 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 PCTPQ9UKL6 214 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 BTRCQ9Y297 605 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 DGKBQ9Y6T7 804 aa10.08□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF318Q5VUA4 2279 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms