RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SLC39A10Q9ULF5 831 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 POLHQ9Y253 713 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 FAM169AQ9Y6X4 670 aa13.89□□□□□ -0.19
HMGN3-201ENST00000275036 A0A1W2PPV9 198 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 ARHGEF33A8MVX0 844 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 E5RI56 91 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 MAP3K7O43318 606 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 HAUS5O94927 633 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 RECKO95980 971 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 PGAM1P18669 254 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 PSMB5P28074 263 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 ATP5DP30049 168 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 PMS2P54278 862 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 TLE1Q04724 770 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 CHAF1BQ13112 559 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 CUL1Q13616 776 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 FASTKQ14296 549 aaKnown RBP13.88□□□□□ -0.19
HMGN3-201ENST00000275036 CRYMQ14894 314 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 UGT8Q16880 541 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 HSP90AA5PQ58FG0 334 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 FCRL6Q6DN72 434 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 KCNMB4Q86W47 210 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 TMEM151BQ8IW70 566 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 SYTL1Q8IYJ3 562 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 ENDOVQ8N8Q3 282 aaKnown RBP13.88□□□□□ -0.19
HMGN3-201ENST00000275036 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
HMGN3-201ENST00000275036 ADAMTS17Q8TE56 1095 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 WDR83Q9BRX9 315 aaKnown RBP13.88□□□□□ -0.19
HMGN3-201ENST00000275036 TRIM51Q9BSJ1 452 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 GPR87Q9BY21 358 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 IARS2Q9NSE4 1012 aaKnown RBP13.88□□□□□ -0.19
HMGN3-201ENST00000275036 FBXO5Q9UKT4 447 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 FARSAQ9Y285 508 aaKnown RBP13.88□□□□□ -0.19
HMGN3-201ENST00000275036 VPS9D1Q9Y2B5 631 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 MAN2B2Q9Y2E5 1009 aa13.88□□□□□ -0.19
HMGN3-201ENST00000275036 PRRC2CQ9Y520 2896 aaKnown RBP13.87□□□□□ -0.19
HMGN3-201ENST00000275036 TP73O15350 636 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 TTI1O43156 1089 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 NRP2O60462 931 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 PSIP1O75475 530 aaKnown RBP13.87□□□□□ -0.19
HMGN3-201ENST00000275036 OR2B3O76000 313 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 KLK3P07288 261 aaPredicted RBP13.87□□□□□ -0.19
HMGN3-201ENST00000275036 CBSLP0DN79 551 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 ERVK-10P10266 1014 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 CBSP35520 551 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 CCNFP41002 786 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 RPS15P62841 145 aaKnown RBP13.87□□□□□ -0.19
HMGN3-201ENST00000275036 YBX1P67809 324 aaKnown RBP13.87□□□□□ -0.19
HMGN3-201ENST00000275036 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGN3-201ENST00000275036 DR1Q01658 176 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 TTC23LQ6PF05 361 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 PCGF5Q86SE9 256 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 SYVN1Q86TM6 617 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 HMGCLL1Q8TB92 370 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 FOPNLQ96NB1 174 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 EBNA1BP2Q99848 306 aaKnown RBP13.87□□□□□ -0.19
HMGN3-201ENST00000275036 TLK1Q9UKI8 766 aa13.87□□□□□ -0.19
HMGN3-201ENST00000275036 RFPL1O75677 317 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 RAB40ALP0C0E4 278 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 ERGP11308 486 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 GABRB3P28472 473 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 GRIA3P42263 894 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 GCGRP47871 477 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 FOXL2P58012 376 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 SF1Q15637 639 aaKnown RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 CYP2A13Q16696 494 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 BBS9Q3SYG4 887 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 LACTB2Q53H82 288 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 HP1BP3Q5SSJ5 553 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 RHBDD2Q6NTF9 364 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 HIBCHQ6NVY1 386 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 FIGLAQ6QHK4 219 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 APLFQ8IW19 511 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 LMNTD2Q8IXW0 634 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 GPR135Q8IZ08 494 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 ZNF655Q8N720 491 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 C2CD4AQ8NCU7 369 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 CD200R1Q8TD46 325 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 CALML6Q8TD86 181 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 KCNJ9Q92806 393 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 SLC22A18Q96BI1 424 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 GBP5Q96PP8 586 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 GPR21Q99679 349 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 FAM167BQ9BTA0 163 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 AARSD1Q9BTE6 412 aaKnown RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 RAB11FIP5Q9BXF6 653 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 NLNQ9BYT8 704 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 CLMPQ9H6B4 373 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 EURLQ9NYK6 297 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 SPATA7Q9P0W8 599 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 SLC17A6Q9P2U8 582 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 DHCR7Q9UBM7 475 aaKnown RBP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 TCFL5Q9UL49 500 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 PLCL2Q9UPR0 1127 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms