RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 HIST1H2AHQ96KK5 128 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 HIST1H2AJQ99878 128 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 INPP5KQ9BT40 448 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 H2AFJQ9BTM1 129 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 BBS2Q9BXC9 721 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 SLC12A9Q9BXP2 914 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 UGT2B28Q9BY64 529 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 CPEB1Q9BZB8 566 aaKnown RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PAIP1Q9H074 479 aaKnown RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 GORASP2Q9H8Y8 452 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PKD2L2Q9NZM6 624 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 KLHL42Q9P2K6 505 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 SNX6Q9UNH7 406 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 INVSQ9Y283 1065 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PCDHGA11Q9Y5H2 935 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 EFCAB14O75071 495 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 LRATO95237 230 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 CXCL14O95715 111 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ATP1B2P14415 290 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 S100A3P33764 101 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 IST1P53990 364 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ESRRGP62508 458 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PHC1P78364 1004 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 GBX1Q14549 363 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PGS1Q32NB8 556 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 TMEM259Q4ZIN3 620 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ZNF648Q5T619 568 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 NEK5Q6P3R8 708 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 GDPD4Q6W3E5 623 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 CLVS1Q8IUQ0 354 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 TCAIMQ8N3R3 496 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 RNF175Q8N4F7 328 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 BEND7Q8N7W2 519 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ASB11Q8WXH4 323 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 SCAMP4Q969E2 229 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ZNF641Q96N77 438 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 CPPED1Q9BRF8 314 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 EMILIN2Q9BXX0 1053 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 HPS4Q9NQG7 708 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 TRIM64CA6NLI5 447 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 H0Y858 1186 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 EIF3FO00303 357 aaPredicted RBP12.55□□□□□ -0.4
CPSF6-201ENST00000266679 CLGNO14967 610 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 NUAK1O60285 661 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 MPC1LP0DKB6 136 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 THRBP10828 461 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 CYP2A7P20853 494 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 TACR1P25103 407 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 SHMT2P34897 504 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 SLC6A12P48065 614 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 ALDH3A2P51648 485 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 TJAP1Q5JTD0 557 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 CDKL4Q5MAI5 379 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 USP51Q70EK9 711 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 HSD11B1LQ7Z5J1 315 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 ELMO1Q92556 727 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 GFM2Q969S9 779 aaKnown RBP12.55□□□□□ -0.4
CPSF6-201ENST00000266679 APIPQ96GX9 242 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 NECAB3Q96P71 396 aaPredicted RBP12.55□□□□□ -0.4
CPSF6-201ENST00000266679 P2RY13Q9BPV8 354 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 NPLQ9BXD5 320 aaPredicted RBP12.55□□□□□ -0.4
CPSF6-201ENST00000266679 EBPLQ9BY08 206 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 CEP44Q9C0F1 390 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 ATG10Q9H0Y0 220 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 PPT2Q9UMR5 302 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 SLC22A14Q9Y267 594 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 PCDHB14Q9Y5E9 798 aa12.55□□□□□ -0.4
CPSF6-201ENST00000266679 TRBV5-3A0A0A0MS03 114 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 FAM220BPB1ANY3 271 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 PRKD3O94806 890 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 PRSS23O95084 383 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SDC1P18827 310 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 HALP42357 657 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 CDKN2CP42773 168 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 CLDN8P56748 225 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 HTRA4P83105 476 aaPredicted RBP12.54□□□□□ -0.4
CPSF6-201ENST00000266679 TEAD2Q15562 447 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 GGTA1PQ4G0N0 100 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 ZDHHC20Q5W0Z9 365 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SLC22A15Q8IZD6 547 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 C10orf111Q8N326 155 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 CYB5D2Q8WUJ1 264 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SORCS1Q8WY21 1168 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SDCCAG3Q96C92 435 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 FAM120BQ96EK7 910 aaKnown RBP12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SH3GL1Q99961 368 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SMURF2Q9HAU4 748 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 DNAJC11Q9NVH1 559 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 GPRC5BQ9NZH0 403 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 EBF1Q9UH73 591 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 INSL6Q9Y581 213 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 TRIOO75962 3097 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 A0A096LPI6 279 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 PRAMEF4O60810 478 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SCELO95171 688 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 CST1P01037 141 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 ALPLP05186 524 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 ADH1AP07327 375 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms