RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ANXA5P08758 320 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 CHRM5P08912 532 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-201ENST00000265304 ANKRD34CP0C6C1 535 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 CCND1P24385 295 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 PEBP1P30086 187 aaKnown RBP13.8□□□□□ -0.2
SSBP1-201ENST00000265304 CSF2RBP32927 897 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 NFKB2Q00653 900 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 RELAQ04206 551 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 BIRC2Q13490 618 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 E2F2Q14209 437 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 SLC5A12Q1EHB4 618 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 ARHGAP22Q7Z5H3 698 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 ZNF761Q86XN6 746 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-201ENST00000265304 PLXDC1Q8IUK5 500 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 SLITRK4Q8IW52 837 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 SRRM1Q8IYB3 904 aaKnown RBP13.8□□□□□ -0.2
SSBP1-201ENST00000265304 RAB42Q8N4Z0 105 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 ADAMTS14Q8WXS8 1223 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 OR2A14Q96R47 310 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 NRTNQ99748 197 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 PCBD2Q9H0N5 130 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 ENAMQ9NRM1 1142 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 HRASLS2Q9NWW9 162 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 APOBEC2Q9Y235 224 aaKnown RBP13.8□□□□□ -0.2
SSBP1-201ENST00000265304 OR6C74A6NCV1 312 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 D6RAR5 112 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 STX16-NPEPL1H3BU86 382 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 COPEO14579 308 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 STX16O14662 325 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 GIPC1O14908 333 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PRPF4O43172 522 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 RPLP0P05388 317 aaKnown RBP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 FTH1P19P0C7X4 201 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 CREB1P16220 341 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 NPPBP16860 134 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PRDX3P30048 256 aaKnown RBP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 CCKBRP32239 447 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 ETV4P43268 484 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 ALDH18A1P54886 795 aaKnown RBP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 SIM1P81133 766 aaPredicted RBP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 INSM1Q01101 510 aaPredicted RBP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 TRA2AQ13595 282 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PUM1Q14671 1186 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PLCL1Q15111 1095 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PCBP2Q15366 365 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 TMPRSS9Q7Z410 1059 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PRSS42Q7Z5A4 293 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 OOSP2Q86WS3 158 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 DCBLD1Q8N8Z6 715 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 RDH11Q8TC12 318 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 KLHL6Q8WZ60 621 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 ZDHHC12Q96GR4 267 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 TSNARE1Q96NA8 513 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 IL17FQ96PD4 163 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 SMC6Q96SB8 1091 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 ABCG4Q9H172 646 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 XKR8Q9H6D3 395 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 C1GALT1Q9NS00 363 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 INTS7Q9NVH2 962 aaKnown RBP13.79□□□□□ -0.2
SSBP1-201ENST00000265304 SPHK1Q9NYA1 384 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 XPR1Q9UBH6 696 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 RNF112Q9ULX5 631 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PLAGL1Q9UM63 463 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 ADAMTS20P59510 1910 aa13.79□□□□□ -0.2
SSBP1-201ENST00000265304 PIPSLA2A3N6 862 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 KRT87PA6NCN2 255 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 C2orf74A8MZ97 194 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 G3V2L1 256 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 CASC3O15234 703 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 MSL3P1P0C860 447 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 DHRS4L1P0CG22 281 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 TYRP1P17643 537 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 AMD1P17707 334 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 OAS2P29728 719 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 GLRBP48167 497 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 NOVA1P51513 510 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 PDX1P52945 283 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 ABATP80404 500 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 PRDX1Q06830 199 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 FASTKQ14296 549 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 SETDB1Q15047 1291 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 N4BP2L1Q5TBK1 243 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 NKAIN2Q5VXU1 208 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 LCTLQ6UWM7 567 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 MBOAT1Q6ZNC8 495 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 KMT5CQ86Y97 462 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 C4orf33Q8N1A6 199 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 Q8N9G6 341 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 NUDT22Q9BRQ3 303 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 UNKQ9C0B0 810 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 CNOT10Q9H9A5 744 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 ACTR10Q9NZ32 417 aa13.78□□□□□ -0.2
SSBP1-201ENST00000265304 TSR3Q9UJK0 312 aaKnown RBP13.78□□□□□ -0.2
SSBP1-201ENST00000265304 IGHV5-10-1A0A0J9YXX1 117 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 SPAARA0A1B0GVQ0 90 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms