RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 HNMTP50135 292 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 GPRC6AQ5T6X5 926 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 OR10A6Q8NH74 314 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 WFDC5Q8TCV5 224 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 SLC22A17Q8WUG5 538 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 RFXANKO14593 260 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 HTRA2O43464 458 aaPredicted RBP15.9■□□□□ 0.14
CTCF-201ENST00000264010 LRATO95237 230 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 ATP1B2P14415 290 aaPredicted RBP15.9■□□□□ 0.14
CTCF-201ENST00000264010 ZNF621Q6ZSS3 439 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 CENPSQ8N2Z9 138 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 SH3KBP1Q96B97 665 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 C12orf4Q9NQ89 552 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 UCKL1Q9NWZ5 548 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 MAP10Q9P2G4 905 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 CD300AQ9UGN4 299 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 A0A1W2PPW3 197 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 ZNF30P17039 623 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 AP1S2P56377 157 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 CYP4F3Q08477 520 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 CHIT1Q13231 466 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 FBXL19Q6PCT2 694 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 PDPRQ8NCN5 879 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 NELL1Q92832 810 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 TMEM125Q96AQ2 219 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 BIRC7Q96CA5 298 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 CXorf21Q9HAI6 301 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 OR2AG2A6NM03 316 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 SCELO95171 688 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 TYRP14679 529 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 PORP16435 677 aaPredicted RBP15.89■□□□□ 0.14
CTCF-201ENST00000264010 CCNA2P20248 432 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 HTR1EP28566 365 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 VIPR1P32241 457 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 EPS8Q12929 822 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 STARD3Q14849 445 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 FNDC3BQ53EP0 1204 aaKnown RBP15.89■□□□□ 0.14
CTCF-201ENST00000264010 PAGE3Q5JUK9 113 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 UGT2A3Q6UWM9 527 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 DNAJB8Q8NHS0 232 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 DHRS1Q96LJ7 313 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 C1QTNF3Q9BXJ4 246 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 PRRG3Q9BZD7 231 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 INTS7Q9NVH2 962 aaKnown RBP15.89■□□□□ 0.14
CTCF-201ENST00000264010 SLCO3A1Q9UIG8 710 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 OGDHLQ9ULD0 1010 aa15.89■□□□□ 0.14
CTCF-201ENST00000264010 NPIPB15A6NHN6 443 aaPredicted RBP15.89■□□□□ 0.13
CTCF-201ENST00000264010 EPN2O95208 641 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 CST1P01037 141 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 BMP2P12643 396 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 CDH1P12830 882 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 PSMD8P48556 350 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 HK3P52790 923 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 CAP1Q01518 475 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 MERTKQ12866 999 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 TEAD2Q15562 447 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 ATP13A5Q4VNC0 1218 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 TTC23Q5W5X9 447 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 PPP4R4Q6NUP7 873 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 IRF7Q92985 503 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 IRF2BPLQ9H1B7 796 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 P2RY12Q9H244 342 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 C11orf49Q9H6J7 331 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 EPS8L2Q9H6S3 715 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 PNMA8BQ9ULN7 279 aaPredicted RBP15.89■□□□□ 0.13
CTCF-201ENST00000264010 TLL1O43897 1013 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 ATG13O75143 517 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 PHC1P78364 1004 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 PHKG1Q16816 387 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 RNF111Q6ZNA4 994 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 TRAPPC5Q8IUR0 188 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 TMEM102Q8N9M5 508 aaPredicted RBP15.89■□□□□ 0.13
CTCF-201ENST00000264010 ZFP28Q8NHY6 868 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 FNDC8Q8TC99 324 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 TRIM63Q969Q1 353 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 PYCR2Q96C36 320 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 REPS1Q96D71 796 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 MTERF3Q96E29 417 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 LRCH3Q96II8 777 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 RAD21L1Q9H4I0 556 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 SPASTQ9UBP0 616 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 INSL6Q9Y581 213 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 PRSS21Q9Y6M0 314 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 TRPM7Q96QT4 1865 aa15.89■□□□□ 0.13
CTCF-201ENST00000264010 EI24O14681 340 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PABPC4LP0CB38 370 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 RAP2AP10114 183 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PFKLP17858 780 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 KIR3DL1P43629 444 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 WDR5P61964 334 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 PON2Q15165 354 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 DGKKQ5KSL6 1271 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 ARMC4Q5T2S8 1044 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 TRMT11Q7Z4G4 463 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 OFCC1Q8IZS5 231 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 CSGALNACT1Q8TDX6 532 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 AP2M1Q96CW1 435 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 IKZF3Q9UKT9 509 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 MAPRE3Q9UPY8 281 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 MYO16Q9Y6X6 1858 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms