RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CTNNB1P35222 781 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 NCBP2P52298 156 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■□□ 15.4
SMG6-201ENST00000263073 RUNDC3AQ59EK9 446 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 CHST9Q7L1S5 443 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 PLD6Q8N2A8 252 aaKnown RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 SMG8Q8ND04 991 aaKnown RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 NFKBIDQ8NI38 313 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 SLC35G5Q96KT7 338 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 KCTD7Q96MP8 289 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 RCOR3Q9P2K3 495 aaPredicted RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 CFAP20Q9Y6A4 193 aaKnown RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 LDB2O43679 373 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 AHSGP02765 367 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 KCNA5P22460 613 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 DDX6P26196 483 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMG6-201ENST00000263073 PUM1Q14671 1186 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMG6-201ENST00000263073 PCLAFQ15004 111 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 INTS6LQ5JSJ4 861 aaKnown RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 EPGNQ6UW88 154 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 NCCRP1Q6ZVX7 275 aaPredicted RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 HMGN2P46Q86SG4 172 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 TREML1Q86YW5 311 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 HID1Q8IV36 788 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 TOMM5Q8N4H5 51 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 OR8D1Q8WZ84 308 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 GAL3ST3Q96A11 431 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 COQ8BQ96D53 544 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 PLEKHA1Q9HB21 404 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 AASSQ9UDR5 926 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 EBF1Q9UH73 591 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 TCHHQ07283 1943 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 BCHEP06276 602 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 YES1P07947 543 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 OR1E2P47887 323 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ERVK-8P63133 956 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 IRAK1BP1Q5VVH5 260 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 COQ8AQ8NI60 647 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 CEP76Q8TAP6 659 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 DNAJC27Q9NZQ0 273 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 FBXL21Q9UKT6 434 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ATRNO75882 1429 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 M0R036 132 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ITIH1P19827 911 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 GLUD2P49448 558 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 CDH4P55283 916 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 RAB39AQ14964 217 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ATXN7L3Q14CW9 347 aaPredicted RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 MINDY4Q4G0A6 757 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 FOXR2Q6PJQ5 311 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ZNF280BQ86YH2 543 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 RNF208Q9H0X6 261 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 CUEDC1Q9NWM3 386 aaPredicted RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 CLIC1O00299 241 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 NIPAL1Q6NVV3 410 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 MSANTD2Q6P1R3 559 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 TMPRSS9Q7Z410 1059 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 TMED4Q7Z7H5 227 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 FBXO15Q8NCQ5 510 aaPredicted RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 PTGDR2Q9Y5Y4 395 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 PSAT1Q9Y617 370 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 H0YGN5 161 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 PER2O15055 1255 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 GRM6O15303 877 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 PCDH7O60245 1069 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 SNAP29O95721 258 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 G6PDP11413 515 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ACVR2AP27037 513 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 S100GP29377 79 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 EIF2S3P41091 472 aaKnown RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 USF2Q15853 346 aaPredicted RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 OCLNQ16625 522 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 RAB12Q6IQ22 244 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 C6orf89Q6UWU4 347 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 PHYKPLQ8IUZ5 450 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ZNF641Q96N77 438 aaPredicted RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 COL21A1Q96P44 957 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ZNF350Q9GZX5 532 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 SACM1LQ9NTJ5 587 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 RDH8Q9NYR8 311 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 MED11Q9P086 117 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 KLF15Q9UIH9 416 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 NFS1Q9Y697 457 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 J3QLW9 94 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ZNF19P17023 458 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 RPS3P23396 243 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMG6-201ENST00000263073 DNAJA1P31689 397 aaKnown RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 GRK5P34947 590 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 IGFALSP35858 605 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 EFR3AQ14156 821 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 KCNJ11Q14654 390 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 HEPACAMQ14CZ8 416 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 PTGES3Q15185 160 aaKnown RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 MYLK3Q32MK0 819 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 MBLAC2Q68D91 279 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 HMBOX1Q6NT76 420 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 AQP11Q8NBQ7 271 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 GALNT6Q8NCL4 622 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms