RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SYT6Q5T7P8 510 aaPredicted RBP17.03■□□□□ 0.32
TRAM1-201ENST00000262213 ATG9BQ674R7 924 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 ARMC8Q8IUR7 673 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 MINDY2Q8NBR6 621 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 PSD4Q8NDX1 1056 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 CDC26Q8NHZ8 85 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 ELMO1Q92556 727 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 ZNF566Q969W8 418 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 EGLN2Q96KS0 407 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 APOL4Q9BPW4 351 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 MAGIXQ9H6Y5 334 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 KRT84Q9NSB2 600 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 SAMHD1Q9Y3Z3 626 aaKnown RBP17.03■□□□□ 0.32
TRAM1-201ENST00000262213 PSMD11O00231 422 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 RPS14P62263 151 aaKnown RBP17.02■□□□□ 0.32
TRAM1-201ENST00000262213 SF3B4Q15427 424 aaKnown RBP eCLIP17.02■□□□□ 0.323e-10■■■□□ 17.8
TRAM1-201ENST00000262213 USP39Q53GS9 565 aaKnown RBP17.02■□□□□ 0.32
TRAM1-201ENST00000262213 SPRYD7Q5W111 196 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 ALG1LQ6GMV1 187 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 SERPINA9Q86WD7 417 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 GLB1L3Q8NCI6 653 aaPredicted RBP17.02■□□□□ 0.32
TRAM1-201ENST00000262213 FAM83FQ8NEG4 500 aaPredicted RBP17.02■□□□□ 0.32
TRAM1-201ENST00000262213 PHF10Q8WUB8 498 aaKnown RBP17.02■□□□□ 0.32
TRAM1-201ENST00000262213 EID2BQ96D98 161 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 UROC1Q96N76 676 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 DPH2Q9BQC3 489 aaPredicted RBP17.02■□□□□ 0.32
TRAM1-201ENST00000262213 P2RY12Q9H244 342 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 OLA1Q9NTK5 396 aaKnown RBP17.02■□□□□ 0.32
TRAM1-201ENST00000262213 TMED5Q9Y3A6 229 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 ZNF451Q9Y4E5 1061 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 PCDHGB1Q9Y5G3 927 aa17.02■□□□□ 0.32
TRAM1-201ENST00000262213 M0QX08 132 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 IRF1P10914 325 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 CR2P20023 1033 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 CREMQ03060 361 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 ATXN7L2Q5T6C5 722 aaPredicted RBP17.02■□□□□ 0.31
TRAM1-201ENST00000262213 SERINC5Q86VE9 423 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 FBLIM1Q8WUP2 373 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 CD244Q9BZW8 370 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 PRM3Q9NNZ6 103 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 SERHLQ9NQF3 203 aa17.02■□□□□ 0.31
TRAM1-201ENST00000262213 LOC100506127A0A0U1RQW1 187 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 IGLV3-27P01718 113 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 SPNP16150 400 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 NR4A2P43354 598 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 GZMMP51124 257 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 VLDLRP98155 873 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 SEMG2Q02383 582 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 MGAT3Q09327 533 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 MAD2L1BPQ15013 274 aaPredicted RBP17.01■□□□□ 0.31
TRAM1-201ENST00000262213 PRSS36Q5K4E3 855 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 RNF219Q5W0B1 726 aaPredicted RBP17.01■□□□□ 0.31
TRAM1-201ENST00000262213 OR4F3Q6IEY1 312 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 CALHM3Q86XJ0 350 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 SYTL1Q8IYJ3 562 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 RHOXF1Q8NHV9 184 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 BHMTQ93088 406 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 TPD52L3Q96J77 140 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 ACPTQ9BZG2 426 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 TRBV5-3A0A0A0MS03 114 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 KDELR3O43731 214 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 ACSL4O60488 711 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 PDYNP01213 254 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 VIPP01282 170 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 ACVR2AP27037 513 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 LIPAP38571 399 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 PPP5CP53041 499 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 SOWAHCQ53LP3 525 aaPredicted RBP17.01■□□□□ 0.31
TRAM1-201ENST00000262213 ZC3H12BQ5HYM0 836 aaKnown RBP17.01■□□□□ 0.31
TRAM1-201ENST00000262213 ATAD3BQ5T9A4 648 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 FAM171A1Q5VUB5 890 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 CAPN13Q6MZZ7 669 aaPredicted RBP17.01■□□□□ 0.31
TRAM1-201ENST00000262213 GPR153Q6NV75 609 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 CCDC71Q8IV32 467 aaPredicted RBP17.01■□□□□ 0.31
TRAM1-201ENST00000262213 CLIP4Q8N3C7 705 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 RNF175Q8N4F7 328 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 SVOPQ8N4V2 548 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 PROX1Q92786 737 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 EBPLQ9BY08 206 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 RNF167Q9H6Y7 350 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 RMND5AQ9H871 391 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 SIRT5Q9NXA8 310 aa17.01■□□□□ 0.31
TRAM1-201ENST00000262213 CAB39Q9Y376 341 aaPredicted RBP17.01■□□□□ 0.31
TRAM1-201ENST00000262213 A0A096LPI6 279 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 RFXANKO14593 260 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 PRAMEF1O95521 474 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 JUNDP17535 347 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 C21orf33P30042 268 aaPredicted RBP17■□□□□ 0.31
TRAM1-201ENST00000262213 EIF2DP41214 584 aaKnown RBP17■□□□□ 0.31
TRAM1-201ENST00000262213 RGS4P49798 205 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 CACNG1Q06432 222 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 CAPSLQ8WWF8 208 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 SELENOMQ8WWX9 145 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 FUBP3Q96I24 572 aaKnown RBP eCLIP17■□□□□ 0.31
TRAM1-201ENST00000262213 ASB8Q9H765 288 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 PPT2Q9UMR5 302 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 SLC45A1Q9Y2W3 748 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 PIKFYVEQ9Y2I7 2098 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 KRT87PA6NCN2 255 aa17■□□□□ 0.31
TRAM1-201ENST00000262213 SNPHO15079 494 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms