RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ZNF649Q9BS31 505 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 AARSD1Q9BTE6 412 aaKnown RBP12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 UCK2Q9BZX2 261 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 LRRN3Q9H3W5 708 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 TLR4O00206 839 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 TOXO94900 526 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CLDN9O95484 217 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SNAP29O95721 258 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 AP2A1O95782 977 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 C11orf91Q3C1V1 193 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CTXN3Q4LDR2 81 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 AKR1C8PQ5T2L2 129 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 DOK6Q6PKX4 331 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMED4Q7Z7H5 227 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 NOXA1Q86UR1 476 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 TICAM1Q8IUC6 712 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC15A3Q8IY34 581 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 BSNDQ8WZ55 320 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SACM1LQ9NTJ5 587 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 NUDT4Q9NZJ9 180 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CYTH4Q9UIA0 394 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 NPEPPSL1A6NEC2 478 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 COQ9O75208 318 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 USP17L7P0C7H9 530 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 NR4A2P43354 598 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 XKP51811 444 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 AIF1P55008 147 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 KLF1Q13351 362 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 ACOX1Q15067 660 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 KRBOX4Q5JUW0 171 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 EMC10Q5UCC4 262 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC25A25Q6KCM7 469 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC2A7Q6PXP3 512 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 FAM198BQ6UWH4 519 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 Q8N402 240 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 AP2M1Q96CW1 435 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SNX27Q96L92 541 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CGREF1Q99674 301 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 BCL7BQ9BQE9 202 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 GON7Q9BXV9 100 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 OR51V1Q9H2C8 321 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 PCDHB7Q9Y5E2 793 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SCAMP3O14828 347 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 CDK4P11802 303 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 SNRPD2P62316 118 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 C9orf64Q5T6V5 341 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ANKRD54Q6NXT1 300 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 LRRN4Q8WUT4 740 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 HSD17B14Q9BPX1 270 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 MCMBPQ9BTE3 642 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 SCP2D1Q9UJQ7 156 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 CDC14AQ9UNH5 594 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 MAP4K5Q9Y4K4 846 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 XKRYO14609 159 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 GMFGO60234 142 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 IFNA17P01571 189 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 SNHG28P0DPA3 235 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 PGAM2P15259 253 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ALDH7A1P49419 539 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 NAE1Q13564 534 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 UBAP2Q5T6F2 1119 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 PHTF2Q8N3S3 785 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ABHD11Q8NFV4 315 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 MFSD3Q96ES6 412 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 CIPCQ9C0C6 399 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 OXSMQ9NWU1 459 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 UXTQ9UBK9 157 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 GCATO75600 419 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 LGALS2P05162 132 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 SPATA31C1P0DKV0 1188 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 CLCN4P51793 760 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 RPS14P62263 151 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 PRKCDQ05655 676 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 SETMARQ53H47 684 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 CRB2Q5IJ48 1285 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 MTFR2Q6P444 385 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ANKRD46Q86W74 232 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 POGLUT1Q8NBL1 392 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 JOSD2Q8TAC2 188 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 CCDC120Q96HB5 630 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 KCNC2Q96PR1 638 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 COPS8Q99627 209 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZBTB26Q9HCK0 441 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 TLR6Q9Y2C9 796 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 PCDHB1Q9Y5F3 818 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 MYOCOSA0A1B0GUC4 107 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 AGAP5A6NIR3 686 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 MEN1O00255 615 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 TGM6O95932 706 aa12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 ANXA4P09525 319 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA3-201ENST00000253812 HNRNPA0Q13151 305 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms