RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 LDLRP01130 860 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 CYP4F3Q08477 520 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 TCEAL5Q5H9L2 206 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 PRR23BQ6ZRT6 265 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 RIMKLAQ8IXN7 391 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 C10orf111Q8N326 155 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 OR2T12Q8NG77 320 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 ZFP28Q8NHY6 868 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 MAGEE2Q8TD90 523 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 BPIFB1Q8TDL5 484 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 TIFAQ96CG3 184 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 APIPQ96GX9 242 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 RBM38Q9H0Z9 239 aaKnown RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 MYRFQ9Y2G1 1151 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 GFYI3L273 518 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 SEC24DO94855 1032 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 IL6P05231 212 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF23P17027 643 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 DHCR24Q15392 516 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 TMEM214Q6NUQ4 689 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ENPP6Q6UWR7 440 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 OFCC1Q8IZS5 231 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 GFM2Q969S9 779 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ZFYVE19Q96K21 471 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ASB16Q96NS5 453 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 HPS4Q9NQG7 708 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 DZANK1Q9NVP4 752 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 UPK3BL1B0FP48 263 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 UPK3BL2E5RIL1 263 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 EIF3FO00303 357 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 PAPLNO95428 1278 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 GSNP06396 782 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ANXA6P08133 673 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 CYP2A6P11509 494 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 CDH1P12830 882 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF30P17039 623 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 PREPP48147 710 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 METAP1P53582 386 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 CTSCP53634 463 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 RPS14P62263 151 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 MESP2Q0VG99 397 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 HYAL1Q12794 435 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ABRQ12979 859 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 NKG7Q16617 165 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 SMU1Q2TAY7 513 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 PLEKHS1Q5SXH7 462 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 GLB1L3Q8NCI6 653 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF548Q8NEK5 533 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 FBXO30Q8TB52 745 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 DGCR14Q96DF8 476 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 EGLN2Q96KS0 407 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 NTN4Q9HB63 628 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 ASIC5Q9NY37 505 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 UTS2RQ9UKP6 389 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 PPT2Q9UMR5 302 aa18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 MAGED1Q9Y5V3 778 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-201ENST00000253754 PABPN1LA6NDY0 278 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 MPC1LP0DKB6 136 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 HALP42357 657 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 ROR2Q01974 943 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 SLC36A3Q495N2 470 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 CCSMST1Q4G0I0 132 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 CDKL4Q5MAI5 379 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 OTUD3Q5T2D3 398 aaPredicted RBP18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 HENMT1Q5T8I9 393 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 CWF19L1Q69YN2 538 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 GPR149Q86SP6 731 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 C12orf40Q86WS4 652 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 RNF217Q8TC41 542 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 OSCP1Q8WVF1 389 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 SMARCD2Q92925 531 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 TMIGD2Q96BF3 282 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 INPP5KQ9BT40 448 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 EBPLQ9BY08 206 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 IL36AQ9UHA7 158 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 SNX6Q9UNH7 406 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 PCDHB14Q9Y5E9 798 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 TSPAN6O43657 245 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 SNAP29O95721 258 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 SDC1P18827 310 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 CYP2A7P20853 494 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 HNMTP50135 292 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 NR1H2P55055 460 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 PFN3P60673 137 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 DMC1Q14565 340 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 GCNT7Q6ZNI0 430 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF786Q8N393 782 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 TCAIMQ8N3R3 496 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 APOLD1Q96LR9 279 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 DNAJC11Q9NVH1 559 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 NDUFA13Q9P0J0 144 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 MARK1Q9P0L2 795 aa18.18■□□□□ 0.5
PDLIM4-201ENST00000253754 A0A1W2PQ67 120 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 KLHL33A6NCF5 533 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 ARHGEF33A8MVX0 844 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 CFAP99D6REC4 459 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 UPK1AO00322 258 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 GSTA4O15217 222 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms