RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 BNIP3LO60238 219 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 AGXTP21549 392 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 ARL1P40616 181 aaPredicted RBP16.58■□□□□ 0.25
FOXA1-201ENST00000250448 STK19P49842 368 aaPredicted RBP16.58■□□□□ 0.25
FOXA1-201ENST00000250448 OXA1LQ15070 435 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 NR6A1Q15406 480 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 MPPE1Q53F39 396 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 ASTLQ6HA08 431 aaPredicted RBP16.58■□□□□ 0.25
FOXA1-201ENST00000250448 FKBP9P1Q75LS8 142 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 LINGO1Q96FE5 620 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 SLC47A1Q96FL8 570 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 ABHD8Q96I13 439 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 TRIB3Q96RU7 358 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 RBM4BQ9BQ04 359 aaKnown RBP16.58■□□□□ 0.25
FOXA1-201ENST00000250448 RBM4Q9BWF3 364 aaKnown RBP16.58■□□□□ 0.25
FOXA1-201ENST00000250448 MROQ9BYG7 248 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 GORASP2Q9H8Y8 452 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 HMG20AQ9NP66 347 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 LIMD1Q9UGP4 676 aa16.58■□□□□ 0.25
FOXA1-201ENST00000250448 KRBA1A5PL33 1030 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 SLC1A7O00341 560 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 ANKRD28O15084 1053 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 DFNA5O60443 496 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 NIPSNAP2O75323 286 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 FUT4P22083 530 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 WEE1P30291 646 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 LAPTM5Q13571 262 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 ANKRD34AQ69YU3 496 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 LAIR2Q6ISS4 152 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 ANKRD13BQ86YJ7 626 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 RMDN1Q96DB5 314 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 HBEGFQ99075 208 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 WDR12Q9GZL7 423 aaKnown RBP16.58■□□□□ 0.24
FOXA1-201ENST00000250448 TNKS2Q9H2K2 1166 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 NAALAD2Q9Y3Q0 740 aa16.58■□□□□ 0.24
FOXA1-201ENST00000250448 DNAJB5O75953 348 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 CAPN1P07384 714 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 PKMP14618 531 aaKnown RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 HLA-FP30511 346 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 VIPR2P41587 438 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 GP2P55259 537 aaKnown RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 RHOAP61586 193 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 PLA2G4EQ3MJ16 856 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 COL13A1Q5TAT6 717 aaPredicted RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 SPESP1Q6UW49 350 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 ZNF548Q8NEK5 533 aaPredicted RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 METTL6Q8TCB7 284 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 NODALQ96S42 347 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 ACTR8Q9H981 624 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 AKIP1Q9NQ31 210 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 VAPAQ9P0L0 249 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 HELZP42694 1942 aaKnown RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 GNGT2O14610 69 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 LSM1O15116 133 aaKnown RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 KATNA1O75449 491 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 INMTO95050 263 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 CR2P20023 1033 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 CDKN1CP49918 316 aaPredicted RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 CTF1Q16619 201 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 AAK1Q2M2I8 961 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 GLT6D1Q7Z4J2 308 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 CPXM2Q8N436 756 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 LPCAT1Q8NF37 534 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 EEF1AKMT1Q8WVE0 214 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 BBS2Q9BXC9 721 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 ATAD3AQ9NVI7 634 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 LHX3Q9UBR4 397 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 ADGRE2Q9UHX3 823 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 UTS2RQ9UKP6 389 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 N6AMT1Q9Y5N5 214 aa16.57■□□□□ 0.24
FOXA1-201ENST00000250448 TNRC18O15417 2968 aaPredicted RBP16.57■□□□□ 0.24
FOXA1-201ENST00000250448 UGT2B4P06133 528 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
FOXA1-201ENST00000250448 PCMT1P22061 227 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 HPCAL1P37235 193 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 IL2P60568 153 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 LY6G5CQ5SRR4 150 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 CD200R1Q8TD46 325 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 PAK1IP1Q9NWT1 392 aaPredicted RBP16.56■□□□□ 0.24
FOXA1-201ENST00000250448 FNDC3AQ9Y2H6 1198 aaKnown RBP16.56■□□□□ 0.24
FOXA1-201ENST00000250448 NDUFS2O75306 463 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 UGT2B11O75310 529 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 PRLP01236 227 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 CTSL3PQ5NE16 218 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 RSPRY1Q96DX4 576 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.56■□□□□ 0.24
FOXA1-201ENST00000250448 RAI2Q9Y5P3 530 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 ST14Q9Y5Y6 855 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 AXIN1O15169 862 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 HS6ST1O60243 411 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 HOXA9P31269 272 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 EIF2B2P49770 351 aaKnown RBP16.56■□□□□ 0.24
FOXA1-201ENST00000250448 ISL1P61371 349 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 CYP4F3Q08477 520 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 AP5B1Q2VPB7 878 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 PLEKHG6Q3KR16 790 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 PERM1Q5SV97 790 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 ZNF691Q5VV52 312 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 FRA10AC1Q70Z53 315 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms