RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 SEC22CQ9BRL7 303 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 AARSD1Q9BTE6 412 aaKnown RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 UGT2B28Q9BY64 529 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 TRIM8Q9BZR9 551 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 SLC39A8Q9C0K1 460 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 PLSCR3Q9NRY6 295 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 SMPD4Q9NXE4 827 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 DNAJB9Q9UBS3 223 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 A0A0A6YYJ9 748 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 LCHNA4D1U4 455 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 DBX1A6NMT0 343 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 SNX4O95219 450 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 ANXA6P08133 673 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 ITGALP20701 1170 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 SAT1P21673 171 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 ERP29P30040 261 aaKnown RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 SHMT2P34897 504 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 PLA2G16P53816 162 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 RAC1P63000 192 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 DBPQ10586 325 aaPredicted RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 FADDQ13158 208 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 AQP6Q13520 282 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 ELOAQ14241 798 aaKnown RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 GRB7Q14451 532 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 PARP15Q460N3 678 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 VPS26BQ4G0F5 336 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 C10orf62Q5T681 223 aaPredicted RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 CLEC6AQ6EIG7 209 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 DESI1Q6ICB0 168 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 FAM180BQ6P0A1 224 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 MSANTD2Q6P1R3 559 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 GPRIN1Q7Z2K8 1008 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 KIF18BQ86Y91 864 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF683Q8IZ20 524 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 PTGR2Q8N8N7 351 aaPredicted RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 CHDHQ8NE62 594 aaPredicted RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 FLCNQ8NFG4 579 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 OR4M1Q8NGD0 313 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 OR6S1Q8NH40 331 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 NSMCE2Q96MF7 247 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 RBM4BQ9BQ04 359 aaKnown RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 BEGAINQ9BUH8 593 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 RBM4Q9BWF3 364 aaKnown RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 LHPPQ9H008 270 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 FBRSL1Q9HCM7 1045 aaKnown RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 ACSS2Q9NR19 701 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 PDGFCQ9NRA1 345 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 SFMBT1Q9UHJ3 866 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 CYB5R1Q9UHQ9 305 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 TRMT6Q9UJA5 497 aaKnown RBP6.16□□□□□ -1.42
SGIP1-201ENST00000237247 NEUROG3Q9Y4Z2 214 aa6.16□□□□□ -1.42
SGIP1-201ENST00000237247 ANAPC1Q9H1A4 1944 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 A0A1W2PRG6 482 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 CLDN5O00501 218 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 E2F3O00716 465 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 SLC22A3O75751 556 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 MT-CYBP00156 380 aaPredicted RBP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 MMP2P08253 660 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 ATXN1LP0C7T5 689 aaKnown RBP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 IL7P13232 177 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 POU2F1P14859 743 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 HLA-DPA1P20036 260 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 MSH3P20585 1137 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 PCSK1P29120 753 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 HLA-FP30511 346 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 NRIP1P48552 1158 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 TPMTP51580 245 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 RENBPP51606 427 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 POLR2JP52435 117 aaKnown RBP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 LRRC74AQ0VAA2 488 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 GRB14Q14449 540 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF273Q14593 569 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 PON2Q15165 354 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 CTF1Q16619 201 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 FAM98BQ52LJ0 330 aaKnown RBP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 GNASQ5JWF2 1037 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 C6orf141Q5SZD1 244 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 TIGD3Q6B0B8 471 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 ADCK1Q86TW2 530 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 NETO2Q8NC67 525 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 FUBP1Q96AE4 644 aaKnown RBP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 YIPF6Q96EC8 236 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 LRCH3Q96II8 777 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF382Q96SR6 550 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 MED10Q9BTT4 135 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 ALG9Q9H6U8 611 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 PRDM5Q9NQX1 630 aaPredicted RBP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 RBM22Q9NW64 420 aaKnown RBP eCLIP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 GMPR2Q9P2T1 348 aaKnown RBP6.15□□□□□ -1.42
SGIP1-201ENST00000237247 CSADQ9Y600 493 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 DOCK4Q8N1I0 1966 aa6.15□□□□□ -1.42
SGIP1-201ENST00000237247 CCDC154A6NI56 674 aa6.15□□□□□ -1.43
SGIP1-201ENST00000237247 HAS3O00219 553 aa6.15□□□□□ -1.43
SGIP1-201ENST00000237247 INPP4BO15327 924 aa6.15□□□□□ -1.43
SGIP1-201ENST00000237247 LDB2O43679 373 aa6.15□□□□□ -1.43
SGIP1-201ENST00000237247 BCAS1O75363 584 aaPredicted RBP6.15□□□□□ -1.43
SGIP1-201ENST00000237247 RHOBTB1O94844 696 aa6.15□□□□□ -1.43
SGIP1-201ENST00000237247 SEMA3DO95025 777 aa6.15□□□□□ -1.43
SGIP1-201ENST00000237247 APBB3O95704 486 aa6.15□□□□□ -1.43
SGIP1-201ENST00000237247 C1RP00736 705 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms