RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GORASP2Q9H8Y8 452 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 KCNH7Q9NS40 1196 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CATSPERZQ9NTU4 200 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 ING4Q9UNL4 249 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 MFSD2BA6NFX1 497 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 WDR47O94967 919 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 EVA1CP58658 441 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 MYL6P60660 151 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CSNK2BP67870 215 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 PSPHP78330 225 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CSTF3Q12996 717 aaKnown RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 GNASQ5JWF2 1037 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 SCUBE3Q8IX30 993 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CDYL2Q8N8U2 506 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 AGBL3Q8NEM8 1001 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 FBXO30Q8TB52 745 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 BTN2A2Q8WVV5 523 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 DNASE1L2Q92874 299 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 MRPL4Q9BYD3 311 aaKnown RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 BARHL1Q9BZE3 327 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 GSX2Q9BZM3 304 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 ZFP64Q9NPA5 681 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 LYARQ9NX58 379 aaKnown RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 LEF1Q9UJU2 399 aaPredicted RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 GPR45Q9Y5Y3 372 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 PQLC2LA1A4F0 135 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 ASB14A6NK59 587 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 MPC2O95563 127 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CFBP00751 764 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 PSAPP07602 524 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 FHP07954 510 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 SELLP14151 372 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 ARSBP15848 533 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 PDGFRAP16234 1089 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CLDN20P56880 219 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 FAM102AQ5T9C2 384 aaPredicted RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 SCYL2Q6P3W7 929 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 C19orf48Q6RUI8 117 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 GLCCI1Q86VQ1 547 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 GTF3C2Q8WUA4 911 aaPredicted RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 ZFPM2Q8WW38 1151 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 APH1BQ8WW43 257 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 UBE2FQ969M7 185 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 TEX37Q96LM6 180 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 SNRNP25Q9BV90 132 aaKnown RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 C1QTNF6Q9BXI9 259 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 TTYH1Q9H313 450 aaPredicted RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 GALNT9Q9HCQ5 603 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 MIOSQ9NXC5 875 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 BTRCQ9Y297 605 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 DNAJC15Q9Y5T4 150 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 TP53BP1Q12888 1972 aaPredicted RBP12.71□□□□□ -0.37
MSH2-201ENST00000233146 A0A1W2PPL8 197 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 AGRPO00253 132 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 ECDO95905 644 aaPredicted RBP12.71□□□□□ -0.37
MSH2-201ENST00000233146 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
MSH2-201ENST00000233146 NPPAP01160 153 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 FAM157BP0CG42 384 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 ZNF37AP17032 561 aaPredicted RBP12.71□□□□□ -0.37
MSH2-201ENST00000233146 ABRQ12979 859 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 RPA4Q13156 261 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 ETFDHQ16134 617 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 KLHL17Q6TDP4 642 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 TAS1R3Q7RTX0 852 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 CCDC71Q8IV32 467 aaPredicted RBP12.71□□□□□ -0.37
MSH2-201ENST00000233146 MFSD6LQ8IWD5 586 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 SENP8Q96LD8 212 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 TRMOQ9BU70 441 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 MLPHQ9BV36 600 aaPredicted RBP12.71□□□□□ -0.37
MSH2-201ENST00000233146 RASSF1Q9NS23 344 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 SDHAF2Q9NX18 166 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 NSMCE4AQ9NXX6 385 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 PTGDR2Q9Y5Y4 395 aa12.71□□□□□ -0.37
MSH2-201ENST00000233146 TUBAL3A6NHL2 446 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 GATCO43716 136 aaKnown RBP12.71□□□□□ -0.38
MSH2-201ENST00000233146 GPX5O75715 221 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 GLAP06280 429 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 KYAT1Q16773 422 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 TECRLQ5HYJ1 363 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 RANBP10Q6VN20 620 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 BRINP3Q76B58 766 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 RDM1Q8NG50 284 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 RAD9AQ99638 391 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 TINAGL1Q9GZM7 467 aaPredicted RBP12.71□□□□□ -0.38
MSH2-201ENST00000233146 PIGUQ9H490 435 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 REV1Q9UBZ9 1251 aa12.71□□□□□ -0.38
MSH2-201ENST00000233146 MICAL3Q7RTP6 2002 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 OR6C65A6NJZ3 312 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 INPPL1O15357 1258 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SLC43A1O75387 559 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 LBPP18428 481 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 GPC1P35052 558 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SLC19A1P41440 591 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 MAP2K3P46734 347 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms