RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 HOXA1P49639 335 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CYP4F2P78329 520 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CYP4F3Q08477 520 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CSTF3Q12996 717 aaKnown RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CLCA4Q14CN2 919 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 AAK1Q2M2I8 961 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 AGKQ53H12 422 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 ARMC4Q5T2S8 1044 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 NECAB2Q7Z6G3 386 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CMC1Q7Z7K0 106 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 GPALPP1Q8IXQ4 340 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 OR8H2Q8N162 312 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 AMER2Q8N7J2 671 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 SCYL1Q96KG9 808 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 KLHL15Q96M94 604 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 RBBP8Q99708 897 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 KLHL21Q9UJP4 597 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 GMPPBQ9Y5P6 360 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 THSD7BQ9C0I4 1608 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 TSC22D2O75157 780 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 PAGE1O75459 146 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CCR10P46092 362 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 PRKAA1Q13131 559 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 FASTKQ14296 549 aaKnown RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 LAIR2Q6ISS4 152 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 STRA8Q7Z7C7 330 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 SCD5Q86SK9 330 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 RTN4RL1Q86UN2 441 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 FAM124AQ86V42 546 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF280BQ86YH2 543 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 HMGCLL1Q8TB92 370 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 FOXJ1Q92949 421 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 AURKBQ96GD4 344 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 ATXN7L3BQ96GX2 97 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF419Q96HQ0 510 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 NXF2Q9GZY0 626 aaKnown RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 SPNS1Q9H2V7 528 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 ACSS2Q9NR19 701 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 ABCC13Q9NSE7 274 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 ING3Q9NXR8 418 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 MRPL42Q9Y6G3 142 aaKnown RBP13.31□□□□□ -0.28
GABPB1-201ENST00000220429 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 DFFAO00273 331 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 MAGEA12P43365 314 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 MAP2K6P52564 334 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 GBX2P52951 348 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 YWHAHQ04917 246 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 FADDQ13158 208 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 KCNC3Q14003 757 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 DAG1Q14118 895 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 FRG1Q14331 258 aaKnown RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 PRPSAP1Q14558 356 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 Q3ZCU0 254 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ARL13AQ5H913 290 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 TIGD7Q6NT04 549 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 HACD2Q6Y1H2 254 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 CLEC4FQ8N1N0 589 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 KDM1BQ8NB78 822 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ISL2Q96A47 359 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 TSGA13Q96PP4 275 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 TRIM62Q9BVG3 475 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 MMP28Q9H239 520 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 NMUR1Q9HB89 426 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ERVK13-1Q9NX77 482 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 LINC00587B1AMM8 73 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 INPP4BO15327 924 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 INPPL1O15357 1258 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 CACNG3O60359 315 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 DFNA5O60443 496 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ALPLP05186 524 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 HOXC13P31276 330 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 PRKAR1BP31321 381 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 RPL35P42766 123 aaKnown RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 AKR1D1P51857 326 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 LIMK2P53671 638 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ERVFC1P60507 584 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF33AQ06730 810 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 LTB4RQ15722 352 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 SLC39A12Q504Y0 691 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 MANEALQ5VSG8 457 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 FSTL4Q6MZW2 842 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ADGRG3Q86Y34 549 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 KLHDC8BQ8IXV7 354 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 TEX47Q8TBZ9 253 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 ENKURQ8TC29 256 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 PHF21AQ96BD5 680 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 SGTBQ96EQ0 304 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms