RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 OVCA2Q8WZ82 227 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 ZNF570Q96NI8 536 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 TWNKQ96RR1 684 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 STRADBQ9C0K7 418 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 ING4Q9UNL4 249 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 TTC24A2A3L6 582 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 DLDP09622 509 aaKnown RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 NELFEP18615 380 aaKnown RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 IL12AP29459 219 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 GDI2P50395 445 aaKnown RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 MS4A13Q5J8X5 152 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 PERM1Q5SV97 790 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 TRMT10BQ6PF06 316 aaKnown RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 ZNF347Q96SE7 839 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 GALTP07902 379 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 HLA-EP13747 358 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 HERVK_113P63132 956 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 LRRC66Q68CR7 880 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 OSTM1Q86WC4 334 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 C11orf24Q96F05 449 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-201ENST00000219334 ERVK-6Q9BXR3 956 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 S100A14Q9HCY8 104 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SPATA7Q9P0W8 599 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 RSL24D1Q9UHA3 163 aaKnown RBP18.53■□□□□ 0.56
SMPD3-201ENST00000219334 MAN2B2Q9Y2E5 1009 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 FAM234BA2RU67 622 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 ENPP2Q13822 863 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SPIN4Q56A73 249 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 OMA1Q96E52 524 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 KXD1Q9BQD3 176 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SIX2Q9NPC8 291 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 KLRF1Q9NZS2 232 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 NID2Q14112 1375 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 A8MUI8 341 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SRPRAP08240 638 aaKnown RBP18.53■□□□□ 0.56
SMPD3-201ENST00000219334 POU2F1P14859 743 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 IQCF2Q8IXL9 164 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SMPD3Q9NY59 655 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-201ENST00000219334 LGALS13Q9UHV8 139 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 AP2A2O94973 939 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 COLEC12Q5KU26 742 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 ZDHHC21Q8IVQ6 265 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 MCFD2Q8NI22 146 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SLC35F5Q8WV83 523 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 TMEM125Q96AQ2 219 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 ZSWIM3Q96MP5 696 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 FAM83CQ9BQN1 747 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SMG9Q9H0W8 520 aaKnown RBP18.53■□□□□ 0.56
SMPD3-201ENST00000219334 ING3Q9NXR8 418 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 ANGPTL1O95841 491 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 CSF2RAP15509 400 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SDC2P34741 201 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 GATMP50440 423 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 GMFBP60983 142 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 ERVK-8P63133 956 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 VLDLRP98155 873 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 PITRM1Q5JRX3 1037 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 LAPTM4BQ86VI4 370 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SVOPLQ8N434 492 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 OXR1Q8N573 874 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 CMASQ8NFW8 434 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-201ENST00000219334 SFXN1Q9H9B4 322 aa18.53■□□□□ 0.56
SMPD3-201ENST00000219334 OAS1P00973 400 aaKnown RBP18.52■□□□□ 0.56
SMPD3-201ENST00000219334 STARP49675 285 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 SEPHS1P49903 392 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 OR10H4Q8NGA5 316 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 LDAHQ9H6V9 325 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 PCDHGB7Q9Y5F8 929 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 KLF8O95600 359 aaPredicted RBP18.52■□□□□ 0.56
SMPD3-201ENST00000219334 IMPDH1P20839 514 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 RPL26P61254 145 aaKnown RBP18.52■□□□□ 0.56
SMPD3-201ENST00000219334 GPR68Q15743 365 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 TMEM44Q2T9K0 475 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 AKIRIN2Q53H80 203 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 FRG2Q64ET8 278 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 CDH24Q86UP0 819 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 SLC51AQ86UW1 340 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 COQ8BQ96D53 544 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 FRG2BQ96QU4 278 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 Q9N2J8 555 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 C11orf16Q9NQ32 467 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.52■□□□□ 0.56
SMPD3-201ENST00000219334 LOC110117498-PIK3R3F6TDL0 507 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 SCDO00767 359 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 GRID2O43424 1007 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 MT-ND1P03886 318 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 RPS9P46781 194 aaKnown RBP18.52■□□□□ 0.56
SMPD3-201ENST00000219334 NRLP54845 237 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 MC1RQ01726 317 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 PUM1Q14671 1186 aaKnown RBP eCLIP18.52■□□□□ 0.56
SMPD3-201ENST00000219334 CENPNQ96H22 339 aaPredicted RBP18.52■□□□□ 0.56
SMPD3-201ENST00000219334 TMEM109Q9BVC6 243 aa18.52■□□□□ 0.56
SMPD3-201ENST00000219334 CBFBQ13951 182 aa18.52■□□□□ 0.55
SMPD3-201ENST00000219334 BICRALQ6AI39 1079 aa18.52■□□□□ 0.55
SMPD3-201ENST00000219334 GPN1Q9HCN4 374 aaPredicted RBP18.52■□□□□ 0.55
SMPD3-201ENST00000219334 NKIRAS2Q9NYR9 191 aa18.52■□□□□ 0.55
SMPD3-201ENST00000219334 PPM1HQ9ULR3 514 aa18.52■□□□□ 0.55
SMPD3-201ENST00000219334 TMEM98Q9Y2Y6 226 aa18.52■□□□□ 0.55
SMPD3-201ENST00000219334 HNRNPA1P09651 372 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMPD3-201ENST00000219334 CLCN4P51793 760 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms