RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ZNF621Q6ZSS3 439 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 GALNT7Q86SF2 657 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 GPR149Q86SP6 731 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 TMEM246Q9BRR3 403 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 TSEN34Q9BSV6 310 aaKnown RBP19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 POLR2AP24928 1970 aaKnown RBP19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 METTL15A6NJ78 407 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 SAGE2PA6NJ88 616 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 CENPXA8MT69 81 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 A8MX80 341 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 OTCP00480 354 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 HOXD11P31277 338 aaPredicted RBP19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 BCL7AQ4VC05 210 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 RUNDC3AQ59EK9 446 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 GALNT13Q8IUC8 556 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 STX19Q8N4C7 294 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 DHRS1Q96LJ7 313 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 TTPALQ9BTX7 342 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 GPR83Q9NYM4 423 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 ST3GAL5Q9UNP4 418 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 BTBD3Q9Y2F9 522 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 WBP11Q9Y2W2 641 aaKnown RBP19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 LTBP3Q9NS15 1303 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 OR2A25A4D2G3 310 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 GLUD1P00367 558 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 STSP08842 583 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 POU2F1P14859 743 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 CDC42EP1Q00587 391 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 TWF1Q12792 350 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 CTSL3PQ5NE16 218 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 ZNF648Q5T619 568 aaPredicted RBP19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 SHQ1Q6PI26 577 aaKnown RBP19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 EGLN2Q96KS0 407 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 CCDC115Q96NT0 180 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 NEDD4LQ96PU5 975 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 REEP1Q9H902 201 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 POPDC3Q9HBV1 291 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 PAQR5Q9NXK6 330 aaPredicted RBP19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 PCDHGB6Q9Y5F9 930 aa19.6■□□□□ 0.73
PPP1R3F-201ENST00000055335 ISPDA4D126 451 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 FFAR2O15552 330 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 PBX3P40426 434 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 MED22Q15528 200 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 ATAD3CQ5T2N8 411 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 CCDC71Q8IV32 467 aaPredicted RBP19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 CITED4Q96RK1 184 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 GPRC5BQ9NZH0 403 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 GPSM3Q9Y4H4 160 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 TRIP12Q14669 1992 aaPredicted RBP19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 RFXANKO14593 260 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 PPP3CCP48454 512 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 ZXDBP98169 803 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 CDC20Q12834 499 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 ZNF792Q3KQV3 632 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 KIAA1614Q5VZ46 1190 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 AFMIDQ63HM1 303 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 PRSS48Q7RTY5 328 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 TMEM132CQ8N3T6 1108 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 GPR150Q8NGU9 434 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 GIMAP4Q9NUV9 329 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 SIRT5Q9NXA8 310 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 PCDHGB1Q9Y5G3 927 aa19.59■□□□□ 0.73
PPP1R3F-201ENST00000055335 PABPN1LA6NDY0 278 aaKnown RBP19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 NTRK1P04629 796 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 IL18R1Q13478 541 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 NRARPQ7Z6K4 114 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 TRIM62Q9BVG3 475 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 CDADC1Q9BWV3 514 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 ZNF408Q9H9D4 720 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 AASDHPPTQ9NRN7 309 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 TSC2P49815 1807 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 LOC730098B7Z3J9 87 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 ARPC4P59998 168 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 FAM171A1Q5VUB5 890 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 OR4F3Q6IEY1 312 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 THEM5Q8N1Q8 247 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 ACBD6Q9BR61 282 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 CINPQ9BW66 212 aaPredicted RBP19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 CCNB1IP1Q9NPC3 277 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 THUMPD1Q9NXG2 353 aaKnown RBP19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 DLGAP4Q9Y2H0 992 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 PLXNA1Q9UIW2 1896 aa19.58■□□□□ 0.73
PPP1R3F-201ENST00000055335 EVPLLA8MZ36 301 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 M0QX08 132 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 KMOO15229 486 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 HOXC11O43248 304 aaPredicted RBP19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 FABP3P05413 133 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 NPRL3Q12980 569 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 TYSND1Q2T9J0 566 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 ARMC4Q5T2S8 1044 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 TRAF7Q6Q0C0 670 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 FAM217AQ8IXS0 508 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 ELMOD1Q8N336 334 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 ASCC1Q8N9N2 400 aaKnown RBP19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 KLHDC9Q8NEP7 349 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 CIPCQ9C0C6 399 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 RAD18Q9NS91 495 aa19.58■□□□□ 0.72
PPP1R3F-201ENST00000055335 KRT87PA6NCN2 255 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 DSCR3O14972 297 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms