RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm3642K7N6V4 267 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 OsmrO70458 971 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mybpc3O70468 1270 aaKnown RBP15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 GcatO88986 416 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Nr2f1Q60632 422 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Olfr1418Q7TQS3 318 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Olfr1037Q7TR84 321 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Csgalnact1Q8BJQ9 530 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Dio3Q91ZI8 304 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tmem176aQ9DCS1 244 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm14496K7N5U4 849 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Elovl3O35949 271 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cer1O55233 272 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sbk3P0C5K0 361 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mup20Q5FW60 181 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Bdkrb1Q61125 334 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 DrgxQ8BYH0 263 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Coq9Q8K1Z0 313 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Timp4Q9JHB3 224 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gsk3bQ9WV60 420 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cst9Q9Z0H6 137 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mast2Q60592 1734 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Vmn2r86G5E8Y4 848 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Rhox6O70238 227 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Atxn2O70305 1285 aaKnown RBP15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CtsdP18242 410 aaKnown RBP15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tuba4aP68368 448 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CrtamQ149L7 389 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Phf24Q80TL4 400 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Prickle2Q80Y24 845 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tab1Q8CF89 502 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Clp1Q99LI9 425 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 NwcQ9CQI4 244 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cmtm6Q9CZ69 183 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 GatmQ9D964 423 aaKnown RBP15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc19a2Q9EQN9 498 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Dnaja2Q9QYJ0 412 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 TesminQ9WTJ6 475 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mtm1Q9Z2C5 603 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm11236J3QMS7 360 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cyp2a12P56593 492 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cxcr5Q04683 374 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Adamts16Q69Z28 1222 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Rslcan18Q7M6X5 460 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 GskipQ8BGR8 139 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Asb14Q8C6Y6 587 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 KptnQ8VCX6 430 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Olfr1325Q8VF43 315 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 DcxrQ91X52 244 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 ProzQ9CQW3 399 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 4930578G10RikQ9D4Q4 153 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mgat4dQ9D4R2 373 aa15.22■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Spin2-ps6A0A140T8V2 174 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm5407E9Q7Q1 248 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Adamts19P59509 1210 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 LchnQ3UHG7 455 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Orm1Q60590 207 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Kcnh1Q60603 989 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc6a4Q60857 630 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Olfr366Q7TRY4 309 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fmo2Q8K2I3 535 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Etv3Q8R4Z4 513 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 ApofQ91V80 315 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Prmt3Q922H1 532 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Prdm5Q9CXE0 599 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Psmd13Q9WVJ2 376 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ankrd16A2AS55 361 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 C7D3YXF5 845 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Aif1O70200 147 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Prf1P10820 554 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ncam1P13595 1115 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Smim24Q0VG18 120 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ankdd1bQ14DN9 521 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Pkp4Q68FH0 1190 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Rgs8Q8BXT1 180 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Zfp940Q8R2Q3 566 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sertad3Q9ERC3 197 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Rgs1Q9JL25 209 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Padi4Q9Z183 666 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 BspryQ80YW5 473 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 McubQ810S1 345 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Hyal5Q812F3 526 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Map2k7Q8CE90 535 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Dclre1cQ8K4J0 705 aa15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Coro1bQ9WUM3 484 aaKnown RBP15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Clic1Q9Z1Q5 241 aaKnown RBP15.21■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm7682A0A0J9YUM1 481 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Slfn9B1ARD6 910 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ccl26F8VQM2 93 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 MaffO54791 156 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cd160O88875 185 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Rc3h2P0C090 1187 aaKnown RBP15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Klf1P46099 358 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 GsrP47791 500 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Rps14P62264 151 aaKnown RBP15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Zfp935Q14DI0 353 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 MarcoQ60754 518 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Sf1Q64213 653 aaKnown RBP15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Trappc6aQ78XR0 159 aa15.21■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Elp6Q8BK75 266 aa15.21■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms