RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gadd45gip1Q9CR59 222 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Hacl1Q9QXE0 581 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 AtmQ62388 3066 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ajap1A2ALI5 412 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Anxa6P14824 673 aaKnown RBP9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Chrm4P32211 479 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PepdQ11136 493 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gtpbp2Q3UJK4 602 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pacs2Q3V3Q7 862 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sim2Q61079 657 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 OmpQ64288 163 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fbxo42Q6PDJ6 717 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 AftphQ80WT5 931 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mab21L3Q8CI17 429 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1276Q8VF40 312 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cbll1Q9JIY2 491 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Akap8lQ9R0L7 642 aaKnown RBP9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ProdhQ9WU79 599 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fem1aaQ9Z2G1 654 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Spag17Q5S003 2320 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gm43796A0A0J9YV32 372 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 4921501E09RikA0A0R4J054 908 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 4930469K13RikA0A286YDB2 92 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Agpat1O35083 285 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lgals7O54974 136 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sp3O70494 783 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 FerP70451 823 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 CcnjlQ5SRT8 387 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Grid2Q61625 1007 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fbxo2Q80UW2 297 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pcmtd2Q8BHD8 359 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 B430218F22RikQ8BQR5 223 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Trim14Q8BVW3 440 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 SdhbQ9CQA3 282 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ddx59Q9DBN9 619 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Golga5Q9QYE6 729 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PodxlQ9R0M4 503 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 CroccQ8CJ40 2009 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ssc4dA1L0T3 586 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Serpini1O35684 410 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Klc1O88447 541 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 RxrbP28704 520 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Id2P41136 134 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pip5k1bP70181 539 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Serping1P97290 504 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rsrp1Q3UC65 298 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zfp868Q3UTQ6 422 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Kcna4Q61423 654 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Hesx1Q61658 185 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tnpo3Q6P2B1 923 aaKnown RBP9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Slc25a12Q8BH59 677 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fam124bQ8BLQ0 456 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 AgpsQ8C0I1 645 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mark4Q8CIP4 752 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Defb35Q8R2I3 63 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr347Q8VGK2 312 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Golga7Q91W53 137 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vnn3Q9QZ25 500 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 RpgrQ9R0X5 1001 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Epb41l1Q9Z2H5 879 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fam131cA2ADB2 273 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Syndig1A2ANU3 258 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zfp599E9PWP1 548 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rgsl1H3BL40 1073 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Myf5P24699 255 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tacr2P30549 384 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Hcrtr1P58307 416 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pag1Q3U1F9 429 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Defb28Q3V2L0 89 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Stox2Q499E5 926 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pon2Q62086 354 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cep78Q6IRU7 790 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sel1l3Q80TS8 1137 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Avl9Q80U56 649 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gstm7Q80W21 218 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rap2cQ8BU31 183 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ly6g6eQ8K1T6 166 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vmn1r22Q8R2D1 302 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Slc25a27Q9D6D0 322 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Prl8a6Q9DAY2 240 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Upk3aQ9JKX8 287 aa9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ascc3E9PZJ8 2198 aaKnown RBP9.65□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lrrc31F6VYM1 502 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Psmb5O55234 264 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Riiad1Q3KNY5 119 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 TchpQ3TVW5 497 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm14226Q3TZL0 686 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 CamkvQ3UHL1 512 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cdkn2cQ60772 168 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 XiapQ60989 496 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Mc2rQ64326 296 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tas2r109Q7M707 316 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr1344Q7TQV3 321 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr1322Q7TQW3 310 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 RragdQ7TT45 449 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rmnd1Q8CI78 450 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tfb1mQ8JZM0 345 aaKnown RBP9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ugt2b34Q8K154 532 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cadm4Q8R464 388 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Crtc3Q91X84 619 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms