RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Mterf1bB9EJ57 379 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Vmn2r22E9Q7S8 853 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 NfkbieO54910 364 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 P01670 111 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 P01671 111 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 P01672 111 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 P04213 122 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ifngr1P15261 477 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zfp37P17141 594 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rab12P35283 243 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pdha2P35487 391 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tead2P48301 445 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ppm1aP49443 382 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Drd4P51436 387 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Il11ra2P70225 432 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 DtlQ3TLR7 729 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Eef2kmtQ3UZW7 335 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cep44Q5HZK1 386 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Maml1Q6T264 1020 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 EedQ921E6 441 aaKnown RBP9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Nmnat1Q9EPA7 285 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Trem1Q9JKE2 230 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dnajb9Q9QYI6 222 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kiaa0100Q5SYL3 2234 aa9.52□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm28576A0A087WRP6 222 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Nlrp1bA1Z198 1177 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mllt3A2AM29 569 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr1215A3KGY3 312 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Vmn2r54K7N649 806 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Bcl7cO08664 217 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Galnt1O08912 559 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Itm2bO89051 266 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 EnpepP16406 945 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Acsl1P41216 699 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mapk1P63085 358 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Col6a2Q02788 1034 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Q3TYS2 187 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CrxosQ3UL53 246 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ipcef1Q5DU31 406 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fam71bQ5STT6 665 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cdkn2cQ60772 168 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Med22Q62276 200 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Smarcal1Q8BJL0 910 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ckap4Q8BMK4 575 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mfsd6Q8CBH5 775 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pphln1Q8K2H1 381 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cdc16Q8R349 620 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Irak4Q8R4K2 459 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pcdhb21Q91V48 774 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gkn2Q9CQS6 184 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Marc1Q9CW42 340 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dsn1Q9CYC5 348 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pus10Q9D3U0 527 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Abhd1Q9QZC8 412 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Plod2Q9R0B9 737 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 PrebQ9WUQ2 417 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zfr2E9Q5M4 874 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm4847G3X946 537 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CskP41241 450 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tuba1cP68373 449 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Armc7Q3UJZ3 198 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Myl12aQ6ZWQ9 172 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Samd3Q8C4H2 520 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Bclaf1Q8K019 919 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CcsapQ8QZT2 252 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Eml3Q8VC03 897 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Riok2Q9CQS5 547 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Raver1Q9CW46 748 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 FopnlQ9CZS3 174 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pinx1Q9CZX5 332 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ift27Q9D0P8 186 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 PyurfQ9D1C3 112 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Agpat5Q9D1E8 365 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kbtbd12Q9D618 625 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rab13Q9DD03 202 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tuba8Q9JJZ2 449 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Htatip2Q9Z2G9 242 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 TriobpQ99KW3 2014 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Skint11A7XV14 364 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 5830411N06RikB3F5L4 1112 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm6569D3YTM9 175 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mybpc1D3YU50 1127 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm19965J3QNY8 723 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ptch2O35595 1182 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Sap18O55128 153 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hipk1O88904 1210 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Emx2Q04744 253 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hp1bp3Q3TEA8 554 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Yy2Q3TTC2 378 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Q3UY34 256 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mef2aQ60929 498 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fzd6Q61089 709 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CcnhQ61458 323 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rsbn1Q80T69 795 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Znf569Q80W31 679 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Thap1Q8CHW1 210 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ebf4Q8K4J2 599 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Vopp1Q8R1C3 172 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr1047Q8VGS0 319 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mlc1Q8VHK5 382 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms