RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 HltfQ6PCN7 1003 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Trappc6aQ78XR0 159 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ppm1lQ8BHN0 360 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Rbm47Q91WT8 590 aaKnown RBP22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Uba7Q9DBK7 977 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cdh22Q9WTP5 813 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Saxo1B1AXP3 476 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Etv2P41163 335 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Perm1Q149B8 807 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Defb23Q30KP0 166 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Hipk4Q3V016 616 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 AbrQ5SSL4 859 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ube2r2Q6ZWZ2 238 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Tas2r38Q7TQA6 331 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Lyve1Q8BHC0 318 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Znf770Q8BIQ8 705 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Nudt4Q8R2U6 179 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Smim11aQ99J19 55 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Scamp4Q9JKV5 230 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cdkl2Q9QUK0 568 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Trgv2A2J008 116 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Mtx3D3YTP3 312 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Vmn2r75G5E8Z7 853 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Rundc3aO08576 446 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Neu1O35657 409 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Rps17P63276 135 aaKnown RBP22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Clec4fP70194 548 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Mocs1Q5RKZ7 636 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Anapc2Q8BZQ7 837 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cep57Q8CEE0 500 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Epsti1Q8VDI1 314 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gtpbp3Q923K4 492 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Krcc1Q99JT5 256 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 4930519G04RikQ9CPT7 205 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Dgat2Q9DCV3 388 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Psmg2Q9EST4 264 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Jph2Q9ET78 696 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Atp6ap1Q9R1Q9 463 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 UxtQ9WTZ0 157 aa22.28■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Nipsnap3aB1AWZ3 247 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Srp54bE9PXC0 504 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Enthd1E9Q1Z2 618 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Olfr891E9Q843 316 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Olfr292F8VQ84 308 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Galnt9G3X942 604 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Alkal1J3QPP8 127 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 E2f3O35261 457 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 P01675 107 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 P01676 107 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 P01677 107 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 P01678 107 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 TrhrP21761 393 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Aqp4P55088 323 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Fam98aQ3TJZ6 515 aaKnown RBP22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Scn4bQ7M729 228 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 HhipQ7TN16 700 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Olfr1197Q7TR13 314 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Olfr1196Q7TR14 314 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gramd1bQ80TI0 738 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ugt2a1Q80X89 528 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gas2l1Q8JZP9 678 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 FbrsQ8R089 466 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Pex19Q8VCI5 299 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cdkal1Q91WE6 578 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Lcn9Q9D267 178 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Slc25a13Q9QXX4 676 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gm14401A2ARV7 303 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Lrrc31F6VYM1 502 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Kcnk4O88454 398 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Epb41P48193 858 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 NficP70255 439 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Sel1l3Q80TS8 1137 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Coq4Q8BGB8 266 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cndp1Q8BUG2 492 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Q8BWQ6 963 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Snx8Q8CFD4 459 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ssh3Q8K330 649 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Trim8Q99PJ2 551 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Kcne2Q9D808 123 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 1700069L16RikQ9D9H5 109 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ddx59Q9DBN9 619 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Rnft1Q9DCN7 395 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Dnaja2Q9QYJ0 412 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Psmd13Q9WVJ2 376 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Bag6Q9Z1R2 1154 aaKnown RBP22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Wdr90Q6ZPG2 1874 aa22.27■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gm21731A0A286YDE9 180 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Mllt3A2AM29 569 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tgfbr3lD3YZZ2 297 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Obox5G3X9P6 291 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pde9aO70628 534 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pou4f1P17208 421 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Lcp2Q60787 533 aaKnown RBP22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Fgfr3Q61851 801 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Ptbp2Q91Z31 531 aaKnown RBP22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Lsm12Q9D0R8 195 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Sars2Q9JJL8 518 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Upk3aQ9JKX8 287 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Nr4a3Q9QZB6 627 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Wdr49A0A0N4SUK7 710 aa22.26■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms