RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 EedQ921E6 441 aaKnown RBP11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Stx11Q9D3G5 287 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Btbd35f21A0A140T8Q5 498 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pabpc4lG5E8X2 370 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Btbd35f22J3QN64 498 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm8926L7MUE8 181 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Foxd2O35392 492 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gh1P06880 216 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gbx2P48031 348 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tial1P70318 392 aaKnown RBP11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tgtp2Q3T9E4 415 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 LchnQ3UHG7 455 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc29a2Q61672 456 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tgtp1Q62293 415 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zbtb24Q80X44 710 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Arhgap11aQ80Y19 987 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dlgap5Q8K4R9 808 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Eml3Q8VC03 897 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Nle1Q8VEJ4 485 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Imp4Q8VHZ7 291 aaKnown RBP11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cadm3Q99N28 396 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 VasnQ9CZT5 673 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Q9DAY5 185 aa11.09□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tdrd6P61407 2134 aa11.08□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gabrr3B2RXA8 464 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cdh18E9Q9Q6 790 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Elovl3O35949 271 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fv4P11370 679 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Dsc3P55850 896 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Q3U7U4 132 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Lingo3Q6GQU6 589 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Rbbp8Q80YR6 893 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 NanogQ80Z64 305 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Nrn1lQ8C4W3 162 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 FggQ8VCM7 436 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Oxct2bQ9ESL0 520 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Oxct2aQ9JJN4 520 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Epb41l4bQ9JMC8 527 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 IkbkeQ9R0T8 717 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Upk1bQ9Z2C6 260 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ambra1A2AH22 1300 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 4930444G20RikD3Z741 495 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Spaca6E9Q8Q8 339 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm5861F6VCN9 180 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 4933402N22RikF7D1B3 190 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 AldocP05063 363 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 PahP16331 453 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Hist2h2acQ64523 129 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Zfp324Q78F42 583 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr1198Q7TR12 308 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 SynbQ8BI41 618 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Aifm2Q8BUE4 373 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Slfn5Q8CBA2 884 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tnfaip8l1Q8K288 186 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 RhoqQ8R527 205 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr791Q8VGJ0 312 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 TraipQ8VIG6 470 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Atoh8Q99NA2 322 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Habp4Q9JKS5 411 aaKnown RBP11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Kat6aQ8BZ21 2003 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Skint11A7XV14 364 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr592E9PYB3 312 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Matn3O35701 481 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Il1aP01582 270 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 P06324 132 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 E2f2P56931 443 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Itga7Q61738 1179 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Snx6Q6P8X1 406 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Paqr3Q6TCG8 311 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 GlyatQ91XE0 296 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 St3gal4Q91Y74 333 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cyp2c55Q9D816 490 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Npc1O35604 1277 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Kcnj1O88335 372 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 H2-D1P14427 368 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Rph3aP47708 681 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Rnf19aP50636 840 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Macrod2Q3UYG8 475 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 GstcdQ5RL51 634 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Znrf3Q5SSZ7 913 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cntn4Q69Z26 1026 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 PxkQ8BX57 582 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ago1Q8CJG1 857 aaKnown RBP11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Trib2Q8K4K3 343 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 EsamQ925F2 394 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cyhr1Q9QXA1 311 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Bloc1s6Q9R0C0 172 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Dgat1Q9Z2A7 498 aa11.08□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm43951A0A0N4SUT6 962 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm8127E9Q0P0 100 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm8094K7N6U8 211 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr237-ps1K9J725 310 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm10324L7N208 604 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Pbx3O35317 434 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 P04213 122 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 CtsdP18242 410 aaKnown RBP11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Rps14P62264 151 aaKnown RBP11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fpr-rs6Q3SXG2 339 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Q3V0E1 1183 aa11.07□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Rbms2Q8VC70 383 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 74.1 ms