RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PYCR2Q96C36 320 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 DUSP23Q9BVJ7 150 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 ERVK-6Q9BXR3 956 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 TNPO3Q9Y5L0 923 aaKnown RBP16.96■□□□□ 0.31
PHGDH-230ENST00000641927 RALGAPA1Q6GYQ0 2036 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 GPR179Q6PRD1 2367 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 GIMD1P0DJR0 217 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 FGF3P11487 239 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-230ENST00000641927 RAB28P51157 221 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 PNLIPRP1P54315 467 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 DNAJB13P59910 316 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 NAE1Q13564 534 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 PTCHD3Q3KNS1 767 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 ZCCHC8Q6NZY4 707 aaKnown RBP16.95■□□□□ 0.3
PHGDH-230ENST00000641927 OGFOD3Q6PK18 319 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 EID2Q8N6I1 236 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 OR4E2Q8NGC2 313 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 LRRC8CQ8TDW0 803 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 TMEM79Q9BSE2 394 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 RAB11FIP5Q9BXF6 653 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 CD244Q9BZW8 370 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 MANSC1Q9H8J5 431 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 SEMA4GQ9NTN9 838 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 SPATA7Q9P0W8 599 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 HCN4Q9Y3Q4 1203 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 ASB1Q9Y576 335 aa16.95■□□□□ 0.3
PHGDH-230ENST00000641927 ZNF839A8K0R7 811 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 TRIM38O00635 465 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 STK16O75716 305 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 WDR47O94967 919 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 HSD17B2P37059 387 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 FASTKQ14296 549 aaKnown RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 PDK4Q16654 411 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ZNF678Q5SXM1 525 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ANKS6Q68DC2 871 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 RPS27LQ71UM5 84 aaKnown RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 TRIM42Q8IWZ5 723 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 GPR156Q8NFN8 814 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 OR4C6Q8NH72 309 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SH3KBP1Q96B97 665 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 GATA5Q9BWX5 397 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SRMSQ9H3Y6 488 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 OPTCQ9UBM4 332 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ICKQ9UPZ9 632 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ANGPTL3Q9Y5C1 460 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 RHPN2P1A8MT19 583 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 PPM1DO15297 605 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 PCDHGA12O60330 932 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 H2AFYO75367 372 aaKnown RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SERPINE1P05121 402 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 MYF5P13349 255 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SHMT2P34897 504 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 FASLGP48023 281 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 PPM1FP49593 454 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 TBPL1P62380 186 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ARHGAP19Q14CB8 494 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SUZ12Q15022 739 aaKnown RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ZXDCQ2QGD7 858 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SUSD1Q6UWL2 747 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 TMEM26Q6ZUK4 368 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 AMIGO1Q86WK6 493 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 RBM12BQ8IXT5 1001 aaKnown RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SLC35F3Q8IY50 421 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ZFPM2Q8WW38 1151 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 CKAP2Q8WWK9 683 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 ZNF75CPQ92670 426 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-230ENST00000641927 L3HYPDHQ96EM0 354 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 MAGEB18Q96M61 343 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SLC38A3Q99624 504 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 EDEM2Q9BV94 578 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 SLC22A14Q9Y267 594 aa16.94■□□□□ 0.3
PHGDH-230ENST00000641927 CABIN1Q9Y6J0 2220 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 E7ENX8 843 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 SIGLEC6O43699 453 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 TSPAN8P19075 237 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 PKLRP30613 574 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 GGT5P36269 586 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 ARL1P40616 181 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-230ENST00000641927 CDH13P55290 713 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 TAP2Q03519 686 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 STX3Q13277 289 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 PCBP2Q15366 365 aaKnown RBP eCLIP16.93■□□□□ 0.3
PHGDH-230ENST00000641927 CYP2A13Q16696 494 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 UNC50Q53HI1 259 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 ATG16L1Q676U5 607 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 CAPN13Q6MZZ7 669 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-230ENST00000641927 TEX9Q8N6V9 391 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 SNX31Q8N9S9 440 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 UBTD2Q8WUN7 234 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 NSUN5Q96P11 429 aaKnown RBP16.93■□□□□ 0.3
PHGDH-230ENST00000641927 MENTQ9BUN1 341 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 SLC32A1Q9H598 525 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 SEMA4BQ9NPR2 832 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-230ENST00000641927 CCDC177Q9NQR7 707 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-230ENST00000641927 LRIT1Q9P2V4 623 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 WDR87Q6ZQQ6 2873 aa16.93■□□□□ 0.3
PHGDH-230ENST00000641927 K7EPI3 171 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 E2F3O00716 465 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 GRK2P25098 689 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms