RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 NR6A1Q15406 480 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 TIGD2Q4W5G0 525 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 C2orf27AQ580R0 203 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 ZNF805Q5CZA5 627 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 ZNF648Q5T619 568 aaPredicted RBP13.51□□□□□ -0.25
ATRIP-208ENST00000639561 TRMT11Q7Z4G4 463 aaKnown RBP13.51□□□□□ -0.25
ATRIP-208ENST00000639561 C11orf74Q86VG3 221 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 ETFBKMTQ8IXQ9 262 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 FAM160A2Q8N612 972 aaPredicted RBP13.51□□□□□ -0.25
ATRIP-208ENST00000639561 TSPEARQ8WU66 669 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 NUDT8Q8WV74 236 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 RIOK2Q9BVS4 552 aaKnown RBP13.51□□□□□ -0.25
ATRIP-208ENST00000639561 VCX3BQ9H321 246 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 ARL15Q9NXU5 204 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 ZIM2Q9NZV7 527 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 SLAMF8Q9P0V8 285 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 ANGPTL3Q9Y5C1 460 aa13.51□□□□□ -0.25
ATRIP-208ENST00000639561 PEX1O43933 1283 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 NUAK1O60285 661 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 TULP3O75386 442 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 SMNDC1O75940 238 aaKnown RBP eCLIP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 G6PDP11413 515 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 DGKEP52429 567 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 POLR2JP52435 117 aaKnown RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 METAP1P53582 386 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 RHDQ02161 417 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 SPEM2Q0P670 501 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 EOGTQ5NDL2 527 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 UBE2R2Q712K3 238 aaPredicted RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 BEND7Q8N7W2 519 aaPredicted RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 ASB11Q8WXH4 323 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 GATA6Q92908 595 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 SLCO4A1Q96BD0 722 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 ITM2BQ9Y287 266 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 TCRBV3S1A0A5B6 114 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 C16orf96A6NNT2 1141 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 PRRT4C9JH25 899 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 EIF3FO00303 357 aaPredicted RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 ANKRD28O15084 1053 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 EEDO75530 441 aaKnown RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 STK16O75716 305 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 ANXA5P08758 320 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 EPB42P16452 691 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 ATP6V1B2P21281 511 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 MRPS35P82673 323 aaKnown RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 EMX2Q04743 252 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 TLR1Q15399 786 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 AP5B1Q2VPB7 878 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 METTL2BQ6P1Q9 378 aaKnown RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 PARS2Q7L3T8 475 aaKnown RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 TMEM102Q8N9M5 508 aaPredicted RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 SKA2Q8WVK7 121 aaPredicted RBP13.5□□□□□ -0.25
ATRIP-208ENST00000639561 LRGUKQ96M69 825 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 NTMT1Q9BV86 223 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 SLC12A9Q9BXP2 914 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 GID8Q9NWU2 228 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 PCDHA9Q9Y5H5 950 aa13.5□□□□□ -0.25
ATRIP-208ENST00000639561 DMDP11532 3685 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 FAM234BA2RU67 622 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TMEM202A6NGA9 273 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 CCDC154A6NI56 674 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 RSL1D1O76021 490 aaKnown RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 SRPRAP08240 638 aaKnown RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TGM1P22735 817 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 MMP12P39900 470 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 HMGCS1Q01581 520 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 NFYCQ13952 458 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 CSRP2Q16527 193 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 RABL3Q5HYI8 236 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 PRMT9Q6P2P2 845 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 CYP20A1Q6UW02 462 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 DPPA4Q7L190 304 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TECPR1Q7Z6L1 1165 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 ZFAND4Q86XD8 727 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TICAM1Q8IUC6 712 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TERB1Q8NA31 727 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 DDHD1Q8NEL9 900 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 DCUN1D1Q96GG9 259 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 ZC3H10Q96K80 434 aaKnown RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 PARVBQ9HBI1 364 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 POLMQ9NP87 494 aaPredicted RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 PARD6AQ9NPB6 346 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 DLL3Q9NYJ7 618 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 DKK3Q9UBP4 350 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 KLQ9UEF7 1012 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 CDV3Q9UKY7 258 aaKnown RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 DTNAQ9Y4J8 743 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 POLR3HQ9Y535 204 aaPredicted RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 CFAP54Q96N23 3096 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 OR2AG2A6NM03 316 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 RNASEH1O60930 286 aaKnown RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 EPN2O95208 641 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 KLF8O95600 359 aaPredicted RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 EBLN1P0CF75 366 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 GGT5P36269 586 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 FOXM1Q08050 763 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 RSPO4Q2I0M5 234 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms