RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 GLS2Q9UI32 602 aa10.54□□□□□ -0.72
CHD2-223ENST00000636306 MAGEL2Q9UJ55 1249 aa10.54□□□□□ -0.72
CHD2-223ENST00000636306 PNMA8BQ9ULN7 279 aaPredicted RBP10.54□□□□□ -0.72
CHD2-223ENST00000636306 TIMM13Q9Y5L4 95 aaPredicted RBP10.54□□□□□ -0.72
CHD2-223ENST00000636306 PLXNA3P51805 1871 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 A0A0J9YYE9 177 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 E2F8A0AVK6 867 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 FAM92AA1XBS5 289 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 CCDC182A6NF36 153 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 PRMT5O14744 637 aaPredicted RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 TSPAN4O14817 238 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 TFECO14948 347 aaPredicted RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 MT-ND2P03891 347 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 HOXB6P17509 224 aaKnown RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 F8A1P23610 371 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 CHMP24386 653 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 ATP5F1P24539 256 aaPredicted RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 EVI2BP34910 448 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 SOX6P35712 828 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 CTSKP43235 329 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 PRMT2P55345 433 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 CSNK2BP67870 215 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 LIPEQ05469 1076 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 RGS1Q08116 209 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 ASAH1Q13510 395 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 NOMO2Q5JPE7 1267 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 BSPRYQ5W0U4 402 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 GLYATQ6IB77 296 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 TYW3Q6IPR3 259 aaKnown RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 CNSTQ6PJW8 725 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 HFE2Q6ZVN8 426 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 LARP4Q71RC2 724 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHD2-223ENST00000636306 GPRIN1Q7Z2K8 1008 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 RBM23Q86U06 439 aaKnown RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 GPAT4Q86UL3 456 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 ADGRG3Q86Y34 549 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 RASGRP3Q8IV61 690 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 AADATQ8N5Z0 425 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 RNF145Q96MT1 663 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 NEDD4LQ96PU5 975 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 PKMYT1Q99640 499 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 GPR22Q99680 433 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 SLC30A2Q9BRI3 323 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 SLC6A15Q9H2J7 730 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 PRDM12Q9H4Q4 367 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 ALG2Q9H553 416 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 CATSPERBQ9H7T0 1116 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 ENTPD7Q9NQZ7 604 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 ING3Q9NXR8 418 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 ELF5Q9UKW6 265 aaPredicted RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 RUVBL2Q9Y230 463 aaKnown RBP10.53□□□□□ -0.72
CHD2-223ENST00000636306 ORC6Q9Y5N6 252 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 PCM1Q15154 2024 aa10.53□□□□□ -0.72
CHD2-223ENST00000636306 TMEM233B4DJY2 109 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 NR5A2O00482 541 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SYN3O14994 580 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 ACSL4O60488 711 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 ADAM11O75078 769 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 PDE9AO76083 593 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SLC34A2O95436 690 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 TSPAN12O95859 305 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SLC2A3P11169 496 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 MTHFD1P11586 935 aaKnown RBP10.52□□□□□ -0.72
CHD2-223ENST00000636306 CKBP12277 381 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 ELNP15502 786 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 MYL9P24844 172 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 BRCC3P46736 316 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 PPP3CCP48454 512 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 MRPL19P49406 292 aaKnown RBP10.52□□□□□ -0.72
CHD2-223ENST00000636306 SLC12A2P55011 1212 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 POLR2GP62487 172 aaKnown RBP eCLIP10.52□□□□□ -0.72
CHD2-223ENST00000636306 CHRNB3Q05901 458 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SLAMF1Q13291 335 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 TAB1Q15750 504 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 AANATQ16613 207 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SETMARQ53H47 684 aaPredicted RBP10.52□□□□□ -0.72
CHD2-223ENST00000636306 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 TAC4Q86UU9 113 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 TAGAPQ8N103 731 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 OR8H2Q8N162 312 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 CCNYL1Q8N7R7 359 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 YIPF7Q8N8F6 280 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 NAT16Q8N8M0 369 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 KCTD4Q8WVF5 259 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 NDRG1Q92597 394 aaKnown RBP10.52□□□□□ -0.72
CHD2-223ENST00000636306 FRMD6Q96NE9 622 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SERPINB11Q96P15 392 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 FERD3LQ96RJ6 166 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 LGMNQ99538 433 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 RTP3Q9BQQ7 232 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SPATA9Q9BWV2 254 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.52□□□□□ -0.725e-7■■■■□ 24.3
CHD2-223ENST00000636306 TKTL2Q9H0I9 626 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 SPNS1Q9H2V7 528 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 FBXO44Q9H4M3 255 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 C3orf14Q9HBI5 128 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 ASAH2Q9NR71 780 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 WDR70Q9NW82 654 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 BFARQ9NZS9 450 aa10.52□□□□□ -0.72
CHD2-223ENST00000636306 RNF6Q9Y252 685 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms