RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 NTRK1P04629 796 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 CBSLP0DN79 551 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 PVRP15151 417 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 CBSP35520 551 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 DHX9Q08211 1270 aaKnown RBP21.56■■□□□ 1.04
SF1-220ENST00000626028 CBLBQ13191 982 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 DNASE1L3Q13609 305 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 NAA25Q14CX7 972 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 HSP90AA5PQ58FG0 334 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 ZNF789Q5FWF6 425 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 LRRC8EQ6NSJ5 796 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 HIBCHQ6NVY1 386 aaPredicted RBP21.56■■□□□ 1.04
SF1-220ENST00000626028 CNTN4Q8IWV2 1026 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 BBOF1Q8ND07 529 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 N4BP2L2Q92802 583 aaPredicted RBP21.56■■□□□ 1.04
SF1-220ENST00000626028 EXTL1Q92935 676 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 IL1RAPL1Q9NZN1 696 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 TUBD1Q9UJT1 453 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 PLAGL1Q9UM63 463 aa21.56■■□□□ 1.04
SF1-220ENST00000626028 E7EQ34 232 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 PSIP1O75475 530 aaKnown RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 SEC31AO94979 1220 aaKnown RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 PEBP1P30086 187 aaKnown RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 HSD17B2P37059 387 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 ETF1P62495 437 aaKnown RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 CYP4F2P78329 520 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 FRG1Q14331 258 aaKnown RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 ARHGAP19Q14CB8 494 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 HIF1AQ16665 826 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 UGT3A1Q6NUS8 523 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 FBXO15Q8NCQ5 510 aaPredicted RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 C2CD4AQ8NCU7 369 aaPredicted RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 OR1L3Q8NH93 324 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 CT55Q8WUE5 264 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 ZUFSPQ96AP4 578 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 ACTR5Q9H9F9 607 aaPredicted RBP21.55■■□□□ 1.04
SF1-220ENST00000626028 DHRS7Q9Y394 339 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 KLK4Q9Y5K2 254 aa21.55■■□□□ 1.04
SF1-220ENST00000626028 MDC1Q14676 2089 aaKnown RBP21.54■■□□□ 1.04
SF1-220ENST00000626028 TARM1B6A8C7 271 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 MEN1O00255 615 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 FANCGO15287 622 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 PRICKLE3O43900 615 aaPredicted RBP21.54■■□□□ 1.04
SF1-220ENST00000626028 CATP04040 527 aaKnown RBP21.54■■□□□ 1.04
SF1-220ENST00000626028 F8A1P23610 371 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 PTPN4P29074 926 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 RORAP35398 523 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 SKIV2L2P42285 1042 aaKnown RBP21.54■■□□□ 1.04
SF1-220ENST00000626028 CCR10P46092 362 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 RPS15P62841 145 aaKnown RBP21.54■■□□□ 1.04
SF1-220ENST00000626028 CYP2A13Q16696 494 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 ZNF549Q6P9A3 640 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 TLDC1Q6P9B6 456 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 CNSTQ6PJW8 725 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 DSELQ8IZU8 1212 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 DNAJC22Q8N4W6 341 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 LMNTD1Q8N9Z9 388 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 DENND1AQ8TEH3 1009 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 INPP5DQ92835 1189 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 CLIP3Q96DZ5 547 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 C17orf62Q9BQA9 187 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 FBXO6Q9NRD1 293 aaPredicted RBP21.54■■□□□ 1.04
SF1-220ENST00000626028 ENAMQ9NRM1 1142 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 PLCL2Q9UPR0 1127 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 MED16Q9Y2X0 877 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 NFS1Q9Y697 457 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 CCDC88CQ9P219 2028 aa21.54■■□□□ 1.04
SF1-220ENST00000626028 SPTA1P02549 2419 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 ZNF839A8K0R7 811 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 H3BMH7 237 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 NKX2-8O15522 239 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 TTI1O43156 1089 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 VPS26AO75436 327 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 CREG1O75629 220 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 C1QL1O75973 258 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 OR2B3O76000 313 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 RAB40ALP0C0E4 278 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 MPC1LP0DKB6 136 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 ERGP11308 486 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 OAS2P29728 719 aaKnown RBP21.53■■□□□ 1.04
SF1-220ENST00000626028 CASQ1P31415 396 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 GABRA4P48169 554 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 ARL4CP56559 192 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 GPS2Q13227 327 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 LY6DQ14210 128 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 ZIC1Q15915 447 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 KLHL38Q2WGJ6 581 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 BBS9Q3SYG4 887 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 MSS51Q4VC12 460 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 ACSBG2Q5FVE4 666 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 MAATS1Q7Z4T9 603 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 SYVN1Q86TM6 617 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 TRIM73Q86UV7 250 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 ZNF843Q8N446 348 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 SLC38A9Q8NBW4 561 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 OR9A1PQ8NGU1 263 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 APOBEC4Q8WW27 367 aaKnown RBP21.53■■□□□ 1.04
SF1-220ENST00000626028 CERS2Q96G23 380 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 FAM60AQ9NP50 221 aa21.53■■□□□ 1.04
SF1-220ENST00000626028 IARS2Q9NSE4 1012 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms