RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CCNB1IP1Q9NPC3 277 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 EIF2B3Q9NR50 452 aaKnown RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 COA4Q9NYJ1 87 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 FAM92AA1XBS5 289 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 FXYD1O00168 92 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 ACKR2O00590 384 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 MFSD11O43934 449 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 RFPL3O75679 317 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 PAPSS2O95340 614 aaPredicted RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 MT-ND2P03891 347 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 ARL4AP40617 200 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 PGGT1BP53609 377 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 CDH17Q12864 832 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 IFRD2Q12894 506 aaPredicted RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 FRG1Q14331 258 aaKnown RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 MXD4Q14582 209 aaPredicted RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 TSC22D1Q15714 1073 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 SPRYD7Q5W111 196 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 SMYD5Q6GMV2 418 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 ARMCX2Q7L311 632 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 PLPPR4Q7Z2D5 763 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 ZDHHC13Q8IUH4 622 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 RBFAQ8N0V3 343 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 GDPD1Q8N9F7 314 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 UTP15Q8TED0 518 aaKnown RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 RIT1Q92963 219 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 SERPINB11Q96P15 392 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 SAV1Q9H4B6 383 aaPredicted RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 MRM3Q9HC36 420 aaKnown RBP10.15□□□□□ -0.78
VPS11-207ENST00000620429 PTPRHQ9HD43 1115 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 LTB4R2Q9NPC1 389 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 SLC39A10Q9ULF5 831 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 PCDHA9Q9Y5H5 950 aa10.15□□□□□ -0.78
VPS11-207ENST00000620429 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.14□□□□□ -0.79
VPS11-207ENST00000620429 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 GATCO43716 136 aaKnown RBP10.14□□□□□ -0.79
VPS11-207ENST00000620429 NPHS1O60500 1241 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 GNRH1P01148 92 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 VTNP04004 478 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 INSRRP14616 1297 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 PRMT2P55345 433 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 MBTD1Q05BQ5 628 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 SEMA3AQ14563 771 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 TRIP4Q15650 581 aaPredicted RBP10.14□□□□□ -0.79
VPS11-207ENST00000620429 KIF19Q2TAC6 998 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 GPR139Q6DWJ6 353 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 PID1Q7Z2X4 250 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 FUNDC1Q8IVP5 155 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 DNAAF3Q8N9W5 541 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 UBASH3BQ8TF42 649 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 ARMC5Q96C12 935 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 SLC47A1Q96FL8 570 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 CPB2Q96IY4 423 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 TBATAQ96M53 351 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 ZSWIM3Q96MP5 696 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 PAK6Q9NQU5 681 aaPredicted RBP10.14□□□□□ -0.79
VPS11-207ENST00000620429 SCN3BQ9NY72 215 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 GINS2Q9Y248 185 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 U3KQV3 271 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 TMEM233B4DJY2 109 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 TULP3O75386 442 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 F9P00740 461 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 PGRP06401 933 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 SBK3P0C264 359 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 STAG3L1P0CL83 205 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 CA5AP35218 305 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 CTSKP43235 329 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 BRCC3P46736 316 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 LIMK1P53667 647 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 ERVFC1P60507 584 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 ARHGAP1Q07960 439 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 ZNF169Q14929 603 aaPredicted RBP10.14□□□□□ -0.79
VPS11-207ENST00000620429 LRFN4Q6PJG9 635 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 ZNF567Q8N184 647 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 CLEC4CQ8WTT0 213 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 ASB15Q8WXK1 588 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 SLC9A6Q92581 669 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 TRMT61AQ96FX7 289 aaKnown RBP10.14□□□□□ -0.79
VPS11-207ENST00000620429 VPS39Q96JC1 886 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 PPP1R2P1Q96PQ5 205 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 SLC19A3Q9BZV2 496 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 FZD8Q9H461 694 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 LRRC4Q9HBW1 653 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 SDHAF3Q9NRP4 125 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 HPF1Q9NWY4 346 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 PRKAG2Q9UGJ0 569 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 RNF6Q9Y252 685 aa10.14□□□□□ -0.79
VPS11-207ENST00000620429 A0A075B6Q4 140 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 A0A087WZ62 844 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 G3V2T6 193 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ABCD4O14678 606 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 HRO43593 1189 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 RGS10O43665 173 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 C22orf31O95567 290 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 FADS2O95864 444 aaKnown RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 MT-ND1P03886 318 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ADCYAP1R1P41586 468 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 GSK3BP49841 420 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 RAB25P57735 213 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms