RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 OR6P1Q8NGX9 317 aa21.24■□□□□ 0.99
SRRT-218ENST00000620394 DHRS4Q9BTZ2 278 aa21.24■□□□□ 0.99
SRRT-218ENST00000620394 TSSK1BQ9BXA7 367 aa21.24■□□□□ 0.99
SRRT-218ENST00000620394 TREX1Q9NSU2 369 aa21.24■□□□□ 0.99
SRRT-218ENST00000620394 TDRKHQ9Y2W6 561 aaKnown RBP21.24■□□□□ 0.99
SRRT-218ENST00000620394 AP1M2Q9Y6Q5 423 aa21.24■□□□□ 0.99
SRRT-218ENST00000620394 CCDC88CQ9P219 2028 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 ZNF185O15231 689 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 HCRTR1O43613 425 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 ZSCAN5DPP0CG00 497 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 RAB28P51157 221 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 KYNUQ16719 465 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 DEFB110Q30KQ9 67 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 PCID2Q5JVF3 399 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 RHBDD2Q6NTF9 364 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 VRK3Q8IV63 474 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 DCUN1D3Q8IWE4 304 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 MPP5Q8N3R9 675 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 ASZ1Q8WWH4 475 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 CATSPERZQ9NTU4 200 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 MARCH4Q9P2E8 410 aaPredicted RBP21.23■□□□□ 0.99
SRRT-218ENST00000620394 PLAGL1Q9UM63 463 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 DRG1Q9Y295 367 aaKnown RBP21.23■□□□□ 0.99
SRRT-218ENST00000620394 NUP210LQ5VU65 1888 aa21.23■□□□□ 0.99
SRRT-218ENST00000620394 CENPEQ02224 2701 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 ANKRD12Q6UB98 2062 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 C9J4A7 227 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 PRMT5O14744 637 aaPredicted RBP21.22■□□□□ 0.99
SRRT-218ENST00000620394 OR2B3O76000 313 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 SLCO2B1O94956 709 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 CBX6O95503 412 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 TTPAP49638 278 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 VWA5B1Q5TIE3 1220 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 FAM69BQ5VUD6 431 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 UNC5DQ6UXZ4 953 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 C4orf22Q6V702 233 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 LINC01555Q8NAE3 123 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 PROKR1Q8TCW9 393 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 SNRNP40Q96DI7 357 aaKnown RBP21.22■□□□□ 0.99
SRRT-218ENST00000620394 GBP5Q96PP8 586 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 C17orf62Q9BQA9 187 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 SLC7A5P2Q9GIP4 190 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 IL22Q9GZX6 179 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 CHRAC1Q9NRG0 131 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 C5AR2Q9P296 337 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 PADI2Q9Y2J8 665 aa21.22■□□□□ 0.99
SRRT-218ENST00000620394 A6NL46 340 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 ZSCAN9O15535 394 aaPredicted RBP21.21■□□□□ 0.99
SRRT-218ENST00000620394 KLF7O75840 302 aaPredicted RBP21.21■□□□□ 0.99
SRRT-218ENST00000620394 RPN2P04844 631 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 AGXTP21549 392 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 AOAHP28039 575 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 GCGRP47871 477 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 CSE1LP55060 971 aaKnown RBP21.21■□□□□ 0.99
SRRT-218ENST00000620394 HSPA14Q0VDF9 509 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 GRB7Q14451 532 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 DNAJC22Q8N4W6 341 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 ZBTB2Q8N680 514 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 N4BP2L2Q92802 583 aaPredicted RBP21.21■□□□□ 0.99
SRRT-218ENST00000620394 C19orf60Q96EN9 201 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 P2RY12Q9H244 342 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 SRPK3Q9UPE1 567 aa21.21■□□□□ 0.99
SRRT-218ENST00000620394 IQCF5A8MTL0 148 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 AP3B1O00203 1094 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 APOA4P06727 396 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 RPS3P23396 243 aaKnown RBP eCLIP21.2■□□□□ 0.98
SRRT-218ENST00000620394 ELOAQ14241 798 aaKnown RBP21.2■□□□□ 0.98
SRRT-218ENST00000620394 C1QL3Q5VWW1 255 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 TLDC1Q6P9B6 456 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 LDB1Q86U70 411 aaPredicted RBP21.2■□□□□ 0.98
SRRT-218ENST00000620394 RAB43Q86YS6 212 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 MAIP1Q8WWC4 291 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 MRM3Q9HC36 420 aaKnown RBP21.2■□□□□ 0.98
SRRT-218ENST00000620394 ASF1BQ9NVP2 202 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 ANAPC5Q9UJX4 755 aa21.2■□□□□ 0.98
SRRT-218ENST00000620394 PRRC2CQ9Y520 2896 aaKnown RBP21.2■□□□□ 0.98
SRRT-218ENST00000620394 ANKUB1A6NFN9 424 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 ISM1B1AKI9 464 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 CD3EAPO15446 510 aaKnown RBP21.19■□□□□ 0.98
SRRT-218ENST00000620394 FGGP02679 453 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 CCDC175P0C221 793 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 CBSLP0DN79 551 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 ARNTP27540 789 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 CBSP35520 551 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 SESN2P58004 480 aaPredicted RBP21.19■□□□□ 0.98
SRRT-218ENST00000620394 CRADDP78560 199 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 BASP1P80723 227 aaKnown RBP21.19■□□□□ 0.98
SRRT-218ENST00000620394 ATP1A4Q13733 1029 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 TMED2Q15363 201 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 LRRC6Q86X45 466 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 KRT222Q8N1A0 295 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 PANX3Q96QZ0 392 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 KIFC1Q9BW19 673 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 SPRTNQ9H040 489 aaPredicted RBP21.19■□□□□ 0.98
SRRT-218ENST00000620394 ENAMQ9NRM1 1142 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 GNPTGQ9UJJ9 305 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 PLCL2Q9UPR0 1127 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 B3GNT3Q9Y2A9 372 aa21.19■□□□□ 0.98
SRRT-218ENST00000620394 CELSR2Q9HCU4 2923 aa21.18■□□□□ 0.98
SRRT-218ENST00000620394 CRYBG3Q68DQ2 2970 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms