RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 EOMESO95936 686 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 BMP4P12644 408 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 BMP1P13497 986 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 IL1RNP18510 177 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 ATF6P18850 670 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 CDKN2CP42773 168 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 MASP1P48740 699 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 CLK3P49761 638 aaKnown RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 LRIF1Q5T3J3 769 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 SLC24A5Q71RS6 500 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 REXO5Q96IC2 774 aaKnown RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 DNMT3BQ9UBC3 853 aaKnown RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 LHX3Q9UBR4 397 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 TRPS1Q9UHF7 1281 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 ABCG2Q9UNQ0 655 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 WDR37Q9Y2I8 494 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 A0A096LPI6 279 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 GAPDHSO14556 408 aaPredicted RBP19.91■□□□□ 0.78
NEK3-208ENST00000618534 PER2O15055 1255 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 CELF2O95319 508 aaKnown RBP19.91■□□□□ 0.78
NEK3-208ENST00000618534 HMGCLP35914 325 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 SLC35A2P78381 396 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 GPR17Q13304 367 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 GTF2H3Q13889 308 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 DGCR6Q14129 220 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 KCNA10Q16322 511 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 INAQ16352 499 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 CXorf57Q6NSI4 855 aaKnown RBP19.91■□□□□ 0.78
NEK3-208ENST00000618534 C17orf99Q6UX52 265 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 CERS6Q6ZMG9 384 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 ZNF551Q7Z340 670 aaPredicted RBP19.91■□□□□ 0.78
NEK3-208ENST00000618534 SETD9Q8NE22 299 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 USP7Q93009 1102 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 ZNF641Q96N77 438 aaPredicted RBP19.91■□□□□ 0.78
NEK3-208ENST00000618534 BCL7BQ9BQE9 202 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 ACPTQ9BZG2 426 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 KCNH6Q9H252 994 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 NECTIN3Q9NQS3 549 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 ZNF682O95780 498 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 EBLN1P0CF75 366 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 CTGFP29279 349 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 MAGEA2P43356 314 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 DAPP51397 102 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 RPS14P62263 151 aaKnown RBP19.91■□□□□ 0.78
NEK3-208ENST00000618534 GBX1Q14549 363 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 PAGE2BQ5JRK9 111 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 ATXN7L2Q5T6C5 722 aaPredicted RBP19.91■□□□□ 0.78
NEK3-208ENST00000618534 RNF165Q6ZSG1 346 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 P2RY8Q86VZ1 359 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 TMEM132CQ8N3T6 1108 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 CEP295NLQ96MC4 621 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 NTMT1Q9BV86 223 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 DUSP21Q9H596 190 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 GKN1Q9NS71 199 aa19.91■□□□□ 0.78
NEK3-208ENST00000618534 A0A1B0GVM2 712 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 ADAMTS4O75173 837 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 JUNDP17535 347 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 DGKAP23743 735 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 PSMB9P28065 219 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 PTPN6P29350 595 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 CORO1AP31146 461 aaKnown RBP19.9■□□□□ 0.78
NEK3-208ENST00000618534 S100A3P33764 101 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 HUNKP57058 714 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 SLC14A1Q13336 389 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 DGUOKQ16854 277 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 FAM26DQ5JW98 314 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 CADM3Q8N126 398 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 ABHD8Q96I13 439 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 ZNF300Q96RE9 604 aaPredicted RBP19.9■□□□□ 0.78
NEK3-208ENST00000618534 GABARAPL1Q9H0R8 117 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 RETREG1Q9H6L5 497 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 PARVBQ9HBI1 364 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 MAN2B2Q9Y2E5 1009 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 TPRKBQ9Y3C4 175 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 SH3BP1Q9Y3L3 701 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 FZD6O60353 706 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 FADS2O95864 444 aaKnown RBP19.9■□□□□ 0.78
NEK3-208ENST00000618534 MT-ND2P03891 347 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 EPB42P16452 691 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 HOXB9P17482 250 aaPredicted RBP19.9■□□□□ 0.78
NEK3-208ENST00000618534 RPS3P23396 243 aaKnown RBP eCLIP19.9■□□□□ 0.78
NEK3-208ENST00000618534 NCS1P62166 190 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 CPSF6Q16630 551 aaKnown RBP eCLIP19.9■□□□□ 0.78
NEK3-208ENST00000618534 SMN1Q16637 294 aaKnown RBP19.9■□□□□ 0.78
NEK3-208ENST00000618534 CAPN13Q6MZZ7 669 aaPredicted RBP19.9■□□□□ 0.78
NEK3-208ENST00000618534 ADCK1Q86TW2 530 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 RBFAQ8N0V3 343 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 ZBTB2Q8N680 514 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 UBTD2Q8WUN7 234 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 TSSK3Q96PN8 268 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 BTBD2Q9BX70 525 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 ASB8Q9H765 288 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 FBXO8Q9NRD0 319 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 GIN1Q9NXP7 522 aa19.9■□□□□ 0.78
NEK3-208ENST00000618534 FCF1Q9Y324 198 aaKnown RBP19.9■□□□□ 0.78
NEK3-208ENST00000618534 MYO1GB0I1T2 1018 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 WNT9AO14904 365 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 DIRAS1O95057 198 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 C1QCP02747 245 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 IRF1P10914 325 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms