RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 LDB1Q86U70 411 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 TRIM73Q86UV7 250 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 ATCAYQ86WG3 371 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 VRK3Q8IV63 474 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 MCATQ8IVS2 390 aaKnown RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 OTUD6BQ8N6M0 293 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 LINC01555Q8NAE3 123 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 ZUFSPQ96AP4 578 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 PTERQ96BW5 349 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 FER1L6-AS2Q96M78 137 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 GBP5Q96PP8 586 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 MENTQ9BUN1 341 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 TRIM55Q9BYV6 548 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 SPRTNQ9H040 489 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 P2RY12Q9H244 342 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 IRAK4Q9NWZ3 460 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 EURLQ9NYK6 297 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 MARCH4Q9P2E8 410 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 IFT80Q9P2H3 777 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 NDOR1Q9UHB4 597 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 TTC7AQ9ULT0 858 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-218ENST00000617172 PLAGL1Q9UM63 463 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 SOX13Q9UN79 622 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 PPP2R2CQ9Y2T4 447 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 JRKLQ9Y4A0 524 aa9.32□□□□□ -0.92
TARDBP-218ENST00000617172 PEX12O00623 359 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 SRPX2O60687 465 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-218ENST00000617172 DPM1O60762 260 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 KLF7O75840 302 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-218ENST00000617172 DNAJB5O75953 348 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 ESR1P03372 595 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 MLNP12872 115 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 NR1D1P20393 614 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 MAGP20916 626 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 MGAT1P26572 445 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 NMBRP28336 390 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 ATP5DP30049 168 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 CXCR5P32302 372 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 PTGIRP43119 386 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 EIF3BP55884 814 aaKnown RBP9.31□□□□□ -0.92
TARDBP-218ENST00000617172 GPS1Q13098 491 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 NAA25Q14CX7 972 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 IGFBP7Q16270 282 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 TYSND1Q2T9J0 566 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 FAM214AQ32MH5 1076 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 NKAIN1Q4KMZ8 207 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 FIGLAQ6QHK4 219 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 KRT222Q8N1A0 295 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 ZBTB2Q8N680 514 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 ZNF655Q8N720 491 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-218ENST00000617172 PRELID2Q8N945 189 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 OR2Y1Q8NGV0 311 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 HMGCLL1Q8TB92 370 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 SKA2Q8WVK7 121 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-218ENST00000617172 MFSD3Q96ES6 412 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 PBKQ96KB5 322 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 XAB2Q9HCS7 855 aaKnown RBP9.31□□□□□ -0.92
TARDBP-218ENST00000617172 ENAMQ9NRM1 1142 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 IL1RAPL1Q9NZN1 696 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 SAMD15Q9P1V8 674 aa9.31□□□□□ -0.92
TARDBP-218ENST00000617172 BSNQ9UPA5 3926 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 FAM237BA0A1B0GVD1 139 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 SDR42E2A6NKP2 422 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 TTLL8A6PVC2 850 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 MATN4O95460 622 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 C1orf105O95561 183 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 ONECUT2O95948 504 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 KRT14P02533 472 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 ALBP02768 609 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CBSLP0DN79 551 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CHRM3P20309 590 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 OGNP20774 298 aaKnown RBP9.3□□□□□ -0.92
TARDBP-218ENST00000617172 ALAS2P22557 587 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 ARNTP27540 789 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 PEBP1P30086 187 aaKnown RBP9.3□□□□□ -0.92
TARDBP-218ENST00000617172 FMO4P31512 558 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CBSP35520 551 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 HSD17B2P37059 387 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 FOLR3P41439 243 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CD97P48960 835 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CCZ1BP86790 482 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CCZ1P86791 482 aaPredicted RBP9.3□□□□□ -0.92
TARDBP-218ENST00000617172 UBAP2LQ14157 1087 aaKnown RBP9.3□□□□□ -0.92
TARDBP-218ENST00000617172 GRB7Q14451 532 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 KCNJ11Q14654 390 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 GRM7Q14831 915 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 DEFB110Q30KQ9 67 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CPZQ66K79 652 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 KIAA0930Q6ICG6 404 aaPredicted RBP9.3□□□□□ -0.92
TARDBP-218ENST00000617172 NEPROQ6NW34 567 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CASC4Q6P4E1 433 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 RASGEF1CQ8N431 466 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 LMNTD1Q8N9Z9 388 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 CLEC1AQ8NC01 280 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 MCUQ8NE86 351 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 LKAAEAR1Q8TD35 194 aa9.3□□□□□ -0.92
TARDBP-218ENST00000617172 MAGOHBQ96A72 148 aaKnown RBP9.3□□□□□ -0.92
TARDBP-218ENST00000617172 MIB2Q96AX9 1013 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms