RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 C22orf39Q6P5X5 142 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 RSPO2Q6UXX9 243 aaPredicted RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHPFQ8IZ52 775 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PARP8Q8N3A8 854 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 C1orf52Q8N6N3 182 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MFSD2AQ8NA29 543 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 MDGA1Q8NFP4 955 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 REXO5Q96IC2 774 aaKnown RBP5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SPATA17Q96L03 361 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 DUSP26Q9BV47 211 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 ANKRD60Q9BZ19 345 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 TDP1Q9NUW8 608 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 PSME2Q9UL46 239 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 SNX8Q9Y5X2 465 aa5.51□□□□□ -1.53
SYNCRIP-204ENST00000616122 FAM92AA1XBS5 289 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CREG1O75629 220 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 HNF1BP35680 557 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 HLCSP50747 726 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ALDH3A2P51648 485 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MYBPC1Q00872 1141 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ABRAXAS2Q15018 415 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 NADSYN1Q6IA69 706 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYP2U1Q7Z449 544 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 GALNT5Q7Z7M9 940 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DSG4Q86SJ6 1040 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TTC30BQ8N4P2 665 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PXYLP1Q8TE99 480 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM125Q96AQ2 219 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 LRCH3Q96II8 777 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CEP295NLQ96MC4 621 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM175Q9BSA9 504 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 EBPLQ9BY08 206 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 YTHDF1Q9BYJ9 559 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PDP1Q9P0J1 537 aaPredicted RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM181Q9P2C4 612 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CEP350Q5VT06 3117 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 A0A1B0GTL3 188 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 H3BNH8 94 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 J3QRK9 145 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SGTAO43765 313 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 FAM20BO75063 409 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SEC24AO95486 1093 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 GSTM1P09488 218 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OCM2P0CE71 109 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OCMP0CE72 109 aaPredicted RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CR2P20023 1033 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OXTRP30559 389 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 NFKB2Q00653 900 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 RAB33AQ14088 237 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 USP39Q53GS9 565 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OR2T5Q6IEZ7 315 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CD300LGQ6UXG3 332 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 AHSA2Q719I0 299 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TSPAN33Q86UF1 283 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ERI1Q8IV48 349 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC22A15Q8IZD6 547 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OR2T29Q8NH02 315 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OR52J3Q8NH60 311 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 BORCS5Q969J3 196 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 FBXL8Q96CD0 374 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PHF12Q96QT6 1004 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 FANCEQ9HB96 536 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DUSP12Q9UNI6 340 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAGED1Q9Y5V3 778 aaPredicted RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAST2Q6P0Q8 1798 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MED13LQ71F56 2210 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 LINC00854A0A1B0GVQ3 168 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 C8GP07360 202 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 BPIP17213 487 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATF6P18850 670 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 RRM2P31350 389 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 GRK3P35626 688 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 POLR2IP36954 125 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC14A2Q15849 920 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 LDLRAP1Q5SW96 308 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 C6orf141Q5SZD1 244 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM220Q6QAJ8 160 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SBSNQ6UWP8 590 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 C17orf64Q86WR6 236 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CROCCP3Q8IVE0 287 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM106CQ9BVX2 250 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 NUAK2Q9H093 628 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MTG2Q9H4K7 406 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM9Q9P0T7 183 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PCDHB3Q9Y5E6 796 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 A0A1B0GTW7 788 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 BCKDKO14874 412 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATG13O75143 517 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 NPPAP01160 153 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PCYT1AP49585 367 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PCBP2Q15366 365 aaKnown RBP eCLIP5.5□□□□□ -1.538e-10■■■■□ 22.3
SYNCRIP-204ENST00000616122 VMACQ2NL98 169 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SPANXN2Q5MJ10 180 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 BRAT1Q6PJG6 821 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ANKFN1Q8N957 763 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 XAGE5Q8WWM1 108 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PPCDCQ96CD2 204 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 REPS1Q96D71 796 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC30A3Q99726 388 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 RIOK2Q9BVS4 552 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms