RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ZFATQ9P243 1243 aa16.16■□□□□ 0.18
CBWD3-211ENST00000615061 DMGDHQ9UI17 866 aaKnown RBP16.16■□□□□ 0.18
CBWD3-211ENST00000615061 KLHL20Q9Y2M5 609 aa16.16■□□□□ 0.18
CBWD3-211ENST00000615061 FER1L5A0AVI2 2057 aa16.16■□□□□ 0.18
CBWD3-211ENST00000615061 KDM1AO60341 852 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 RAD1O60671 282 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 PSIP1O75475 530 aaKnown RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 DLGAP3O95886 979 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TUBB4AP04350 444 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 WT1P19544 449 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 GUCY2DQ02846 1103 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 MGAT5Q09328 741 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 IL11RAQ14626 422 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 ARHGAP40Q5TG30 622 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 PRAMEF17Q5VTA0 474 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 BROXQ5VW32 411 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 PWWP2BQ6NUJ5 590 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TTC23LQ6PF05 361 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 CYHR1Q6ZMK1 362 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 GALNT7Q86SF2 657 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 CARFQ8N187 725 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 MMGT1Q8N4V1 131 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 CCNL2Q96S94 520 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 FAM60AQ9NP50 221 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 PDE7BQ9NP56 450 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TRMT6Q9UJA5 497 aaKnown RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 RARRES3Q9UL19 164 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TMEM184BQ9Y519 407 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 HCRTR1O43613 425 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 SPAG6O75602 509 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 KIAA0754O94854 1291 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 CCNFP41002 786 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 GPX6P59796 221 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TUBB4BP68371 445 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 ACY1Q03154 408 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TUBB2AQ13885 445 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 COL9A2Q14055 689 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 FASTKQ14296 549 aaKnown RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 PAQR3Q6TCH7 311 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 STRA8Q7Z7C7 330 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 PALM2Q8IXS6 379 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 CACNA2D3Q8IZS8 1091 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 IL22RA1Q8N6P7 574 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 OR2L8Q8NGY9 312 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 EEF1AKMT1Q8WVE0 214 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 SEC14L1Q92503 715 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 ZNF501Q96CX3 271 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-211ENST00000615061 OLFM1Q99784 485 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TUBB2BQ9BVA1 445 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 PRORYQ9H606 182 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 TAS2R13Q9NYV9 303 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 KLHL42Q9P2K6 505 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 LNPEPQ9UIQ6 1025 aa16.15■□□□□ 0.18
CBWD3-211ENST00000615061 A0A0J9YY10 115 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 CTAGE15A4D2H0 777 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 CXorf49A8MYA2 514 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-211ENST00000615061 EIF3HO15372 352 aaKnown RBP eCLIP16.14■□□□□ 0.17
CBWD3-211ENST00000615061 CTAGE8P0CG41 777 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 PSMB5P28074 263 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 TMPRSS3P57727 454 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 CAV1Q03135 178 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 KIR2DS3Q14952 304 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 DEFB110Q30KQ9 67 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 TMTC4Q5T4D3 741 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 HECTD2Q5U5R9 776 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 CDHR3Q6ZTQ4 885 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 CTAGE6Q86UF2 777 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 CTAGE4Q8IX94 777 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 C19orf47Q8N9M1 422 aaKnown RBP16.14■□□□□ 0.17
CBWD3-211ENST00000615061 GALNT6Q8NCL4 622 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 ASB11Q8WXH4 323 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 ZDHHC18Q9NUE0 388 aa16.14■□□□□ 0.17
CBWD3-211ENST00000615061 TCRBV9S1A1TA0A576 114 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 NTRK1P04629 796 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 ENO3P13929 434 aaPredicted RBP16.13■□□□□ 0.17
CBWD3-211ENST00000615061 MAGP20916 626 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 YBX1P67809 324 aaKnown RBP16.13■□□□□ 0.17
CBWD3-211ENST00000615061 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.13■□□□□ 0.17
CBWD3-211ENST00000615061 MANEAQ5SRI9 462 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 CCDC81Q6ZN84 652 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 NEK10Q6ZWH5 1172 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 NLGN4XQ8N0W4 816 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 MNS1Q8NEH6 495 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 NLGN4YQ8NFZ3 816 aaPredicted RBP16.13■□□□□ 0.17
CBWD3-211ENST00000615061 OR9A1PQ8NGU1 263 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 DLG3Q92796 817 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 PKP4Q99569 1192 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 MDC1Q14676 2089 aaKnown RBP16.13■□□□□ 0.17
CBWD3-211ENST00000615061 LOC101059948A0A1B0GTJ6 334 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 TMEM150CB9EJG8 249 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 PRICKLE3O43900 615 aaPredicted RBP16.13■□□□□ 0.17
CBWD3-211ENST00000615061 C1QAP02745 245 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 CATP04040 527 aaKnown RBP16.13■□□□□ 0.17
CBWD3-211ENST00000615061 CTSBP07858 339 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 MPC1LP0DKB6 136 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 SAT1P21673 171 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 FDXRP22570 491 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 MAGEA4P43358 317 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 SLC5A12Q1EHB4 618 aa16.13■□□□□ 0.17
CBWD3-211ENST00000615061 C3orf62Q6ZUJ4 267 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms