RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 FER1L5A0AVI2 2057 aa11.72□□□□□ -0.53
PDLIM2-218ENST00000614502 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
PDLIM2-218ENST00000614502 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 PEX12O00623 359 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 PRMT5O14744 637 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 ZSCAN9O15535 394 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 IPO13O94829 963 aaKnown RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 S1PR4O95977 384 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 FOLR3P41439 243 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 HSPA14Q0VDF9 509 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 SNX1Q13596 522 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 KYNUQ16719 465 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 PTCHD3Q3KNS1 767 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 ZC3H12BQ5HYM0 836 aaKnown RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 YOD1Q5VVQ6 348 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 MLIPQ5VWP3 458 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 ZNF385CQ66K41 422 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 LCN10Q6JVE6 187 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 LRRC6Q86X45 466 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 DCUN1D3Q8IWE4 304 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 MAGEC3Q8TD91 643 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 NACC2Q96BF6 587 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 OSBPL9Q96SU4 736 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 IL22Q9GZX6 179 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 SLAMF7Q9NQ25 335 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 HOMER3Q9NSC5 361 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 CATSPERZQ9NTU4 200 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 BFARQ9NZS9 450 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 IFT80Q9P2H3 777 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 GNPTGQ9UJJ9 305 aa11.71□□□□□ -0.53
PDLIM2-218ENST00000614502 CES2O00748 559 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 ZNF185O15231 689 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 OR1I1O60431 355 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 GPC4O75487 556 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 ALPPP05187 535 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 CD9P21926 228 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 PKLRP30613 574 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 CCR7P32248 378 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 GABRA4P48169 554 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 NPY2RP49146 381 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 CDK16Q00536 496 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 CHAF1BQ13112 559 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 PTRHD1Q6GMV3 140 aaKnown RBP11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 DNAJC22Q8N4W6 341 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 ZBTB2Q8N680 514 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 PRELID2Q8N945 189 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 CLEC1AQ8NC01 280 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 COG1Q8WTW3 980 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 PTERQ96BW5 349 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 MS4A14Q96JA4 679 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 VPS50Q96JG6 964 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 FOPNLQ96NB1 174 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 SMAD5Q99717 465 aaKnown RBP11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 SLC29A3Q9BZD2 475 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 FAM60AQ9NP50 221 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 SPHK1Q9NYA1 384 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 SLC2A6Q9UGQ3 507 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 SLC39A10Q9ULF5 831 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 SNX12Q9UMY4 172 aa11.7□□□□□ -0.54
PDLIM2-218ENST00000614502 H3BMH7 237 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 RASGRF2O14827 1237 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 CD3EAPO15446 510 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 NDUFS3O75489 264 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 SLCO2B1O94956 709 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 RNF224P0DH78 156 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 CBSLP0DN79 551 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 ETS1P14921 441 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 GNLYP22749 145 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 RPS3P23396 243 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 AOAHP28039 575 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 OTX2P32243 289 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 CBSP35520 551 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 CCNFP41002 786 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 KCNJ1P48048 391 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 CSE1LP55060 971 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 GNG11P61952 73 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 BASP1P80723 227 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 SARNPP82979 210 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 NAA25Q14CX7 972 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 DEFB110Q30KQ9 67 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 TCTE1Q5JU00 501 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 FHL5Q5TD97 284 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 VWA5B1Q5TIE3 1220 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 ARMC3Q5W041 872 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 NAPRTQ6XQN6 538 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 ZNF534Q76KX8 674 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 GSTA5Q7RTV2 222 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 SDCCAG8Q86SQ7 713 aaPredicted RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 TRIM73Q86UV7 250 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 ZNF655Q8N720 491 aaPredicted RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 OR2Y1Q8NGV0 311 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 OR2L8Q8NGY9 312 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 FLVCR1-AS1Q8TAF5 88 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 TM9SF4Q92544 642 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 PNPLA2Q96AD5 504 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 ZUFSPQ96AP4 578 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 RAD51AP1Q96B01 352 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms