RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KLK8O60259 260 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 MYF5P13349 255 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 ALDH4A1P30038 563 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 PKLRP30613 574 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 ALDH18A1P54886 795 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 NR1D2Q14995 579 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 CYP2A13Q16696 494 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 PFKFB4Q16877 469 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 AGTRAPQ6RW13 159 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 ZYG11AQ6WRX3 759 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 MBOAT1Q6ZNC8 495 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 RAB44Q7Z6P3 723 aaPredicted RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 SLC22A9Q8IVM8 553 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 OR2L8Q8NGY9 312 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 HMGCLL1Q8TB92 370 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 ZNF480Q8WV37 535 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 MENTQ9BUN1 341 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 EPB41L1Q9H4G0 881 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 XKR8Q9H6D3 395 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 CNOT10Q9H9A5 744 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 KCNK4Q9NYG8 393 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 WWOXQ9NZC7 414 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 COPG2Q9UBF2 871 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 PTBP2Q9UKA9 531 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 ICKQ9UPZ9 632 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 U3KQA8 63 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 KRT87PA6NCN2 255 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 G3V2L1 256 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 IPO13O94829 963 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 UBXN7O94888 489 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 ERGP11308 486 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 AMD1P17707 334 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 CCND1P24385 295 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 IMPA1P29218 277 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 GGT5P36269 586 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 PPP2R2AP63151 447 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 MPP2Q14168 576 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 GUSBP11Q6P575 273 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 EFL1Q7Z2Z2 1120 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 ZNF761Q86XN6 746 aaPredicted RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 ANKRD42Q8N9B4 389 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 OR10G6Q8NH81 332 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 DENND1AQ8TEH3 1009 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 SREK1Q8WXA9 508 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 JPH3Q8WXH2 748 aaPredicted RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 SMPDL3AQ92484 453 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 CCDC74AQ96AQ1 378 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 PHF21BQ96EK2 531 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 AHCYL2Q96HN2 611 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 IL17FQ96PD4 163 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 TBC1D10AQ9BXI6 508 aa14.25□□□□□ -0.13
CD48-203ENST00000613788 TNPO3Q9Y5L0 923 aaKnown RBP14.25□□□□□ -0.13
CD48-203ENST00000613788 A8MT66 165 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 E7ENX8 843 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 STX16-NPEPL1H3BU86 382 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 STX16O14662 325 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 TNFSF14O43557 240 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 DLX3O60479 287 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 CBFA2T3O75081 653 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 ACP1P24666 158 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 ETV4P43268 484 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 PPM1FP49593 454 aaPredicted RBP14.24□□□□□ -0.13
CD48-203ENST00000613788 GPLD1P80108 840 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 NFKB2Q00653 900 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 TAP2Q03519 686 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 ASPHQ12797 758 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 PRKAA1Q13131 559 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 NAE1Q13564 534 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 SETDB1Q15047 1291 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 HHATQ5VTY9 493 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 ARMC6Q6NXE6 501 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 METTL2BQ6P1Q9 378 aaKnown RBP14.24□□□□□ -0.13
CD48-203ENST00000613788 OOSP2Q86WS3 158 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 KIAA2013Q8IYS2 634 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 PTGR2Q8N8N7 351 aaPredicted RBP14.24□□□□□ -0.13
CD48-203ENST00000613788 OR56A3Q8NH54 315 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 IFI44Q8TCB0 444 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 NETO1Q8TDF5 533 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 SLC22A18Q96BI1 424 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 ATG10Q9H0Y0 220 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 HRASLS2Q9NWW9 162 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 ENTPD2Q9Y5L3 495 aa14.24□□□□□ -0.13
CD48-203ENST00000613788 PIPSLA2A3N6 862 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 OR6C74A6NCV1 312 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 MATN2O00339 956 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 TAPBPO15533 448 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 STK16O75716 305 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 PROS1P07225 676 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 GP1BAP07359 652 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 NR1D1P20393 614 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 OR1D5P58170 312 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 KIR2DS3Q14952 304 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 PTCHD3Q3KNS1 767 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 CAPN13Q6MZZ7 669 aaPredicted RBP14.23□□□□□ -0.13
CD48-203ENST00000613788 PIP4P1Q86T03 277 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 ADGRF3Q8IZF5 1079 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 C2orf73Q8N5S3 287 aaPredicted RBP14.23□□□□□ -0.13
CD48-203ENST00000613788 ARFGAP2Q8N6H7 521 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 Q8N9G6 341 aaPredicted RBP14.23□□□□□ -0.13
CD48-203ENST00000613788 LINC01555Q8NAE3 123 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms