RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MYEOVQ96EZ4 313 aa6.23□□□□□ -1.41
SNX13-213ENST00000611725 PPP1R16AQ96I34 528 aa6.23□□□□□ -1.41
SNX13-213ENST00000611725 HEBP1Q9NRV9 189 aa6.23□□□□□ -1.41
SNX13-213ENST00000611725 NUAK1O60285 661 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 SERPINA1P01009 418 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CD9P21926 228 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 OXTRP30559 389 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 S100A5P33763 92 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TRPC1P48995 793 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ELP6Q0PNE2 266 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TRAF3Q13114 568 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 KCNAB2Q13303 367 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ZNF697Q5TEC3 545 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CXorf57Q6NSI4 855 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 CRTC1Q6UUV9 634 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.22□□□□□ -1.41
SNX13-213ENST00000611725 KCTD8Q6ZWB6 473 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 C1orf52Q8N6N3 182 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 RAD51AP1Q96B01 352 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ZNF641Q96N77 438 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 TRIB3Q96RU7 358 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 SMG9Q9H0W8 520 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 RASSF1Q9NS23 344 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PDP1Q9P0J1 537 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 ENOPH1Q9UHY7 261 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 A0A1B0GTL3 188 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 NPIPB15A6NHN6 443 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 ANKDD1BA6NHY2 528 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 H7C0S8 307 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CCL16O15467 120 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CBSLP0DN79 551 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CXCR2P25025 360 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CBSP35520 551 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 IST1P53990 364 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 LSM3P62310 102 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 CBX2Q14781 532 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 CCSAPQ6IQ19 270 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 TMEM220Q6QAJ8 160 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 GDPD4Q6W3E5 623 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 MBOAT1Q6ZNC8 495 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TMPRSS11BQ86T26 416 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PHYKPLQ8IUZ5 450 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 SMG7Q92540 1137 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 RHBDF1Q96CC6 855 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PPCDCQ96CD2 204 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TRMT2BQ96GJ1 504 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 QRFPRQ96P65 431 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ZNF385DQ9H6B1 395 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 FANCEQ9HB96 536 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 H3BNH8 94 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 BCKDKO14874 412 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TRIM24O15164 1050 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 NOBOXO60393 691 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CREG1O75629 220 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 SRCP12931 536 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PRKACGP22612 351 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 JAK1P23458 1154 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 HNMTP50135 292 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 HLCSP50747 726 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 USP39Q53GS9 565 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 PLPP4Q5VZY2 271 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 R3HCC1LQ7Z5L2 792 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 FIBINQ8TAL6 211 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 RAB2BQ8WUD1 216 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 REXO5Q96IC2 774 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 ITM2CQ9NQX7 267 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TMED5Q9Y3A6 229 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 RP1L1Q8IWN7 2480 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 EIF3FO00303 357 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 ATP1B2P14415 290 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 RRM2P31350 389 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 RXRGP48443 463 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 RAB15P59190 212 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 RUNX1T1Q06455 604 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ATP1A4Q13733 1029 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 GK3PQ14409 553 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 GRM2Q14416 872 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PTPRRQ15256 657 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 FNDC3BQ53EP0 1204 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 FOXB2Q5VYV0 432 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ALG1LQ6GMV1 187 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 OR10Q1Q8NGQ4 319 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 OR5K1Q8NHB7 308 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 OTUB1Q96FW1 271 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 ZNF514Q96K75 400 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 MCMBPQ9BTE3 642 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 KCNH6Q9H252 994 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CWH43Q9H720 699 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CORO2BQ9UQ03 480 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 SNX8Q9Y5X2 465 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 WNT6Q9Y6F9 365 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 hCG_2039718K7EN88 272 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 SOCS2O14508 198 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TSPAN12O95859 305 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CSF2RAP15509 400 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 FPR1P21462 350 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PPP2R1BP30154 601 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 GRK3P35626 688 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 MAPK9P45984 424 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TMCO2Q7Z6W1 182 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms