RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ZNF382Q96SR6 550 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 OR2B2Q9GZK3 357 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 MED28Q9H204 178 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 POLR3BQ9NW08 1133 aaPredicted RBP14.34□□□□□ -0.11
VPS36-207ENST00000611132 CLCA2Q9UQC9 943 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 DOCK2Q92608 1830 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 MYH9P35579 1960 aaKnown RBP14.34□□□□□ -0.11
VPS36-207ENST00000611132 SERPINB7O75635 380 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 PFKMP08237 780 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 ARHGAP1Q07960 439 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 CHIT1Q13231 466 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 PTPRCAPQ14761 206 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 NHSL2Q5HYW2 709 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 SYCE2Q6PIF2 218 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 LARP4Q71RC2 724 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS36-207ENST00000611132 SYVN1Q86TM6 617 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 CDK20Q8IZL9 346 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 TBC1D14Q9P2M4 693 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 ENPP5Q9UJA9 477 aa14.34□□□□□ -0.11
VPS36-207ENST00000611132 ANKRD36CQ5JPF3 1778 aa14.33□□□□□ -0.11
VPS36-207ENST00000611132 IGKV6-21A0A0C4DH24 114 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 FAM172BPA6NC97 362 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ARVCFO00192 962 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 PIRO00625 290 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 CPNE3O75131 537 aaKnown RBP14.33□□□□□ -0.12
VPS36-207ENST00000611132 CNTN5O94779 1100 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ENGP17813 658 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 CDKN2DP55273 166 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 GNG2P59768 71 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
VPS36-207ENST00000611132 ABRQ12979 859 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 GOLGA7Q7Z5G4 137 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 LGI4Q8N135 537 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 OR6K2Q8NGY2 324 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 TEX47Q8TBZ9 253 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 BBS4Q96RK4 519 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ATG10Q9H0Y0 220 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 SGK2Q9HBY8 427 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 HS3ST4Q9Y661 456 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ADAMTS7Q9UKP4 1686 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 GADD45GO95257 159 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 KCNE1P15382 129 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 PRPS1L1P21108 318 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 NFKB2Q00653 900 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 TSTQ16762 297 aaKnown RBP14.33□□□□□ -0.12
VPS36-207ENST00000611132 SLC7A5P1Q8MH63 180 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 UBE2E3Q969T4 207 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 RPL10LQ96L21 214 aaKnown RBP14.33□□□□□ -0.12
VPS36-207ENST00000611132 ZNF607Q96SK3 696 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 BRD9Q9H8M2 597 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ITGB1P05556 798 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 CHRM5P08912 532 aaPredicted RBP14.33□□□□□ -0.12
VPS36-207ENST00000611132 NR2F1P10589 423 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 SMARCB1Q12824 385 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ZFAND4Q86XD8 727 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ATAD1Q8NBU5 361 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 HJURPQ8NCD3 748 aaPredicted RBP14.33□□□□□ -0.12
VPS36-207ENST00000611132 LRRC20Q8TCA0 184 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 ANKRD49Q8WVL7 239 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 SPATA5L1Q9BVQ7 753 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 GPN2Q9H9Y4 310 aaPredicted RBP14.33□□□□□ -0.12
VPS36-207ENST00000611132 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.33□□□□□ -0.12
VPS36-207ENST00000611132 POFUT2Q9Y2G5 429 aa14.33□□□□□ -0.12
VPS36-207ENST00000611132 DDX60Q8IY21 1712 aaKnown RBP14.32□□□□□ -0.12
VPS36-207ENST00000611132 SLITRK5O94991 958 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 CD40LGP29965 261 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 CD52P31358 61 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 STX4Q12846 297 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 OR4F3Q6IEY1 312 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 TRNT1Q96Q11 434 aaKnown RBP14.32□□□□□ -0.12
VPS36-207ENST00000611132 C11orf16Q9NQ32 467 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 CACNG4Q9UBN1 327 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 GULP1Q9UBP9 304 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 TLR6Q9Y2C9 796 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.32□□□□□ -0.12
VPS36-207ENST00000611132 TBL1XO60907 577 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 BEST1O76090 585 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 FGF4P08620 206 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 PSKH1P11801 424 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 STAT5AP42229 794 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 PTGR1Q14914 329 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 DCST1Q5T197 706 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 KANK2Q63ZY3 851 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 SDE2Q6IQ49 451 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 LYSMD3Q7Z3D4 306 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 ZFP90Q8TF47 636 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 MRPL48Q96GC5 212 aaKnown RBP14.32□□□□□ -0.12
VPS36-207ENST00000611132 QRFPRQ96P65 431 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 IL12RB2Q99665 862 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 TMEM246Q9BRR3 403 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 MARCH4Q9P2E8 410 aaPredicted RBP14.32□□□□□ -0.12
VPS36-207ENST00000611132 PRELID1Q9Y255 219 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 LAMB1P07942 1786 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 DDNO94850 711 aaPredicted RBP14.32□□□□□ -0.12
VPS36-207ENST00000611132 AKR1A1P14550 325 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 PRKAG1P54619 331 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 SNAPC1Q16533 368 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 TBRG1Q3YBR2 411 aa14.32□□□□□ -0.12
VPS36-207ENST00000611132 PAGE3Q5JUK9 113 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms