RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 CD1DP15813 335 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 BDKRB1P46663 353 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 KPNA2P52292 529 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 PDX1P52945 283 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 FOXC1Q12948 553 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 TARDBPQ13148 414 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 ZNF460Q14592 562 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 ACAP2Q15057 778 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 PPP1R3AQ16821 1122 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 SLC5A12Q1EHB4 618 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 TSNAXIP1Q2TAA8 658 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 IRGCQ6NXR0 463 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 SBSNQ6UWP8 590 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 CMC1Q7Z7K0 106 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 AGBL5Q8NDL9 886 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 RHEBL1Q8TAI7 183 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 KIAA1191Q96A73 305 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 PKNOX2Q96KN3 472 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 TGM7Q96PF1 710 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 PKP4Q99569 1192 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 PITPNM3Q9BZ71 974 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 B3GNT4Q9C0J1 378 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 NRSN2Q9GZP1 204 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 CHRNA10Q9GZZ6 450 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 PCBD2Q9H0N5 130 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 OARD1Q9Y530 152 aa16.03■□□□□ 0.16
SHKBP1-219ENST00000599575 CCDC187A0A096LP49 1063 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 GSAPA4D1B5 854 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 POLR2CP19387 275 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 PRDX3P30048 256 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 CSTF2P33240 577 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 PNLIPRP1P54315 467 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 NAA30Q147X3 362 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 PHF19Q5T6S3 580 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 FBXO38Q6PIJ6 1188 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 IGF2-ASQ6U949 168 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 SPESP1Q6UW49 350 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 LSMEM2Q8N112 164 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 TCAIMQ8N3R3 496 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 LINC01555Q8NAE3 123 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 MYRIPQ8NFW9 859 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 WDR36Q8NI36 951 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 DENND1AQ8TEH3 1009 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 KLHL6Q8WZ60 621 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 DLG3Q92796 817 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 CCDC74BQ96LY2 380 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 TSNARE1Q96NA8 513 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 SEMA6CQ9H3T2 930 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 ZNF768Q9H5H4 540 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 XKR8Q9H6D3 395 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 ARL15Q9NXU5 204 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 ACTR10Q9NZ32 417 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 TSR3Q9UJK0 312 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 ADAMTS6Q9UKP5 1117 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 MSRB2Q9Y3D2 182 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 PCDHGA8Q9Y5G5 932 aa16.02■□□□□ 0.16
SHKBP1-219ENST00000599575 SYCE1LA8MT33 242 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 E7ENX8 843 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 HYAL3O43820 417 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 RASSF9O75901 435 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 ZBTB11O95625 1053 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 SYF2O95926 243 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 SHBGP04278 402 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 ANXA5P08758 320 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 MSL3P1P0C860 447 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 OAS2P29728 719 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 TAP2Q03519 686 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 CSHL1Q14406 222 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 PHKG1Q16816 387 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 CCSMST1Q4G0I0 132 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 CACHD1Q5VU97 1274 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 FRA10AC1Q70Z53 315 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 TMPRSS9Q7Z410 1059 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 LMNTD1Q8N9Z9 388 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 ZNF480Q8WV37 535 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 FBXL8Q96CD0 374 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 SLC41A2Q96JW4 573 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 INTS7Q9NVH2 962 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 ARGLU1Q9NWB6 273 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 EURLQ9NYK6 297 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 PCDHB11Q9Y5F2 797 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 KLK4Q9Y5K2 254 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 RP1P56715 2156 aa16.01■□□□□ 0.15
SHKBP1-219ENST00000599575 ISM1B1AKI9 464 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 B4E171 279 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 CDC7O00311 574 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 PRICKLE3O43900 615 aaPredicted RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 KERAO60938 352 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 RFPL1O75677 317 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 IPO13O94829 963 aaKnown RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 CCNDBP1O95273 360 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 MT-ND3P03897 115 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 GSTA1P08263 222 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 RBP1P09455 135 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 NELFEP18615 380 aaKnown RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 HRH2P25021 359 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 IMPA1P29218 277 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 TSPAN7P41732 249 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 LSSP48449 732 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms