RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
SCAF1-202ENST00000595242 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 A8MX80 341 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 DPM1O60762 260 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 PMPCBO75439 489 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 TGDSO95455 350 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 EPOP01588 193 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 TPH1P17752 444 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 NFKBIAP25963 317 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ARNTP27540 789 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ACTR1BP42025 376 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ARCN1P48444 511 aaKnown RBP12.52□□□□□ -0.41
SCAF1-202ENST00000595242 POLD2P49005 469 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ACTR1AP61163 376 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 DSC2Q02487 901 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ILF2Q12905 390 aaKnown RBP12.52□□□□□ -0.41
SCAF1-202ENST00000595242 DNASE1L3Q13609 305 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 IHHQ14623 411 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ACOX1Q15067 660 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 CHRNA6Q15825 494 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 SLC6A19Q695T7 634 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-202ENST00000595242 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 GALNT7Q86SF2 657 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 LCA5Q86VQ0 697 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 CAMK1DQ8IU85 385 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 BBS5Q8N3I7 341 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 SLC37A2Q8TED4 501 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 THAP4Q8WY91 577 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 SPOCK2Q92563 424 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 PNPLA2Q96AD5 504 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 PSKH2Q96QS6 385 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 GPR22Q99680 433 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 MGME1Q9BQP7 344 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 TEX101Q9BY14 249 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ING2Q9H160 280 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 MANSC1Q9H8J5 431 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 C20orf96Q9NUD7 363 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-202ENST00000595242 KLHL14Q9P2G3 628 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 LHX3Q9UBR4 397 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 DCDC2Q9UHG0 476 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 PADI1Q9ULC6 663 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 RIMKLBQ9ULI2 386 aa12.52□□□□□ -0.41
SCAF1-202ENST00000595242 ANKUB1A6NFN9 424 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 ARGFXA6NJG6 315 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 MYO1CO00159 1063 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 PAMP19021 973 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 HLA-DPA1P20036 260 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 CD86P42081 329 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 MAPK9P45984 424 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 ACVR1Q04771 509 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 CDK18Q07002 472 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 ELOAQ14241 798 aaKnown RBP12.51□□□□□ -0.41
SCAF1-202ENST00000595242 ZNF235Q14590 738 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 CYTH1Q15438 398 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 HSP90AA5PQ58FG0 334 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 SPDYAQ5MJ70 313 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.51□□□□□ -0.41
SCAF1-202ENST00000595242 KIAA0408Q6ZU52 694 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 NLRP9Q7RTR0 991 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 TRPM8Q7Z2W7 1104 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 STRA8Q7Z7C7 330 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 RASGRP3Q8IV61 690 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 LMNTD2Q8IXW0 634 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 SFRP1Q8N474 314 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 OTUD6BQ8N6M0 293 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 C10orf82Q8WW14 230 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 SNRNP40Q96DI7 357 aaKnown RBP12.51□□□□□ -0.41
SCAF1-202ENST00000595242 POM121Q96HA1 1249 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 ZNF778Q96MU6 729 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 C7orf26Q96N11 449 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 FAM167BQ9BTA0 163 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 C12orf65Q9H3J6 166 aaKnown RBP12.51□□□□□ -0.41
SCAF1-202ENST00000595242 RHOJQ9H4E5 214 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 ACTL8Q9H568 366 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 RUBCNLQ9H714 662 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 SLCO1B3Q9NPD5 702 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 SNX15Q9NRS6 342 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 ASF1BQ9NVP2 202 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
SCAF1-202ENST00000595242 EMCNQ9ULC0 261 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 PCDHGB7Q9Y5F8 929 aa12.51□□□□□ -0.41
SCAF1-202ENST00000595242 CCDC88CQ9P219 2028 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 NIPBLQ6KC79 2804 aaeCLIP12.5□□□□□ -0.41
SCAF1-202ENST00000595242 MROH6A6NGR9 719 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 PLIN3O60664 434 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 BPGMP07738 259 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 CES1P23141 567 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 PSMA3P25788 255 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 CHRNA4P43681 627 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 MAXP61244 160 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 CDK3Q00526 305 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 HHEXQ03014 270 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 NFATC2Q13469 925 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 LAMB3Q13751 1172 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 IL11RAQ14626 422 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 POU6F1Q14863 301 aa12.5□□□□□ -0.41
SCAF1-202ENST00000595242 UGT8Q16880 541 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms