RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CASC4Q6P4E1 433 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 TLDC1Q6P9B6 456 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 TEX19Q8NA77 164 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 RAD51AP1Q96B01 352 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 BIRC8Q96P09 236 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 IRAK4Q9NWZ3 460 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 KLHL20Q9Y2M5 609 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 MRFAP1Q9Y605 127 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 SPTA1P02549 2419 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 ZSCAN9O15535 394 aaPredicted RBP22.6■■□□□ 1.21
LSM4-204ENST00000594828 CTSBP07858 339 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 CBSLP0DN79 551 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 PAMP19021 973 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 MAGP20916 626 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 CBSP35520 551 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 COILP38432 576 aaPredicted RBP22.6■■□□□ 1.21
LSM4-204ENST00000594828 PTGIRP43119 386 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 SF1Q15637 639 aaKnown RBP22.6■■□□□ 1.21
LSM4-204ENST00000594828 TYSND1Q2T9J0 566 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 C1orf189Q5VU69 101 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 ANKRD22Q5VYY1 191 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 TAX1BP1Q86VP1 789 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 CAND1Q86VP6 1230 aaKnown RBP22.6■■□□□ 1.21
LSM4-204ENST00000594828 ZNF655Q8N720 491 aaPredicted RBP22.6■■□□□ 1.21
LSM4-204ENST00000594828 LPGAT1Q92604 370 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 FOPNLQ96NB1 174 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 NAP1L3Q99457 506 aaPredicted RBP22.6■■□□□ 1.21
LSM4-204ENST00000594828 C17orf62Q9BQA9 187 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 DHRS4Q9BTZ2 278 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 RAB11FIP5Q9BXF6 653 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 SAMD15Q9P1V8 674 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 PADI2Q9Y2J8 665 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 CRYL1Q9Y2S2 319 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 NFS1Q9Y697 457 aa22.6■■□□□ 1.21
LSM4-204ENST00000594828 MAGEB16A2A368 324 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 H3BMM5 538 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 TMEM63AO94886 807 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 C1orf105O95561 183 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 ESR1P03372 595 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 DCDP81605 110 aaKnown RBP22.59■■□□□ 1.21
LSM4-204ENST00000594828 COLEC12Q5KU26 742 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 MLIPQ5VWP3 458 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 CCDC137Q6PK04 289 aaKnown RBP22.59■■□□□ 1.21
LSM4-204ENST00000594828 RAB42Q8N4Z0 105 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 PROKR1Q8TCW9 393 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 SLC25A23Q9BV35 468 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 TXLNGQ9NUQ3 528 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 INTS7Q9NVH2 962 aaKnown RBP22.59■■□□□ 1.21
LSM4-204ENST00000594828 EURLQ9NYK6 297 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 DHCR7Q9UBM7 475 aaKnown RBP22.59■■□□□ 1.21
LSM4-204ENST00000594828 GPN3Q9UHW5 284 aaPredicted RBP22.59■■□□□ 1.21
LSM4-204ENST00000594828 SRPK3Q9UPE1 567 aa22.59■■□□□ 1.21
LSM4-204ENST00000594828 SDR42E2A6NKP2 422 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 NIPSNAP2O75323 286 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 PDGFAP04085 211 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 MLNP12872 115 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 OGNP20774 298 aaKnown RBP22.58■■□□□ 1.21
LSM4-204ENST00000594828 ADARP55265 1226 aaKnown RBP22.58■■□□□ 1.21
LSM4-204ENST00000594828 CYP1B1Q16678 543 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 NEPROQ6NW34 567 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 MCATQ8IVS2 390 aaKnown RBP22.58■■□□□ 1.21
LSM4-204ENST00000594828 ZBTB2Q8N680 514 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 MCUQ8NE86 351 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 MAGEC3Q8TD91 643 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 GBP5Q96PP8 586 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 NDC1Q9BTX1 674 aa22.58■■□□□ 1.21
LSM4-204ENST00000594828 RUVBL2Q9Y230 463 aaKnown RBP22.58■■□□□ 1.21
LSM4-204ENST00000594828 PCDHGA9Q9Y5G4 932 aaKnown RBP22.58■■□□□ 1.21
LSM4-204ENST00000594828 FAM237BA0A1B0GVD1 139 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 PGRMC1O00264 195 aaKnown RBP22.57■■□□□ 1.2
LSM4-204ENST00000594828 CD63P08962 238 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 ATXN8OSP0DMR3 200 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 CHRM3P20309 590 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 CCNFP41002 786 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 BDKRB1P46663 353 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 PGDP52209 483 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 DHX34Q14147 1143 aaKnown RBP22.57■■□□□ 1.2
LSM4-204ENST00000594828 IGFBP7Q16270 282 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 CCSMST1Q4G0I0 132 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 CNSTQ6PJW8 725 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 FIGLAQ6QHK4 219 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 RAB43Q86YS6 212 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 FAM136AQ96C01 138 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 XAB2Q9HCS7 855 aaKnown RBP22.57■■□□□ 1.2
LSM4-204ENST00000594828 IFT80Q9P2H3 777 aaPredicted RBP22.57■■□□□ 1.2
LSM4-204ENST00000594828 VPS9D1Q9Y2B5 631 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 NEU2Q9Y3R4 380 aa22.57■■□□□ 1.2
LSM4-204ENST00000594828 GOLGA8MH3BSY2 632 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 PRICKLE3O43900 615 aaPredicted RBP22.56■■□□□ 1.2
LSM4-204ENST00000594828 KLF7O75840 302 aaPredicted RBP22.56■■□□□ 1.2
LSM4-204ENST00000594828 FKBP9O95302 570 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 GRIA3P42263 894 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 SSPNQ14714 243 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 ANKRD20A4Q4UJ75 823 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 ZC3H12BQ5HYM0 836 aaKnown RBP22.56■■□□□ 1.2
LSM4-204ENST00000594828 FCRL6Q6DN72 434 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 CENPUQ71F23 418 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 MED25Q71SY5 747 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 CILP2Q8IUL8 1156 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 REXO1L1PQ8IX06 675 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms