RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ADRA1DP25100 572 aa23■■□□□ 1.27
LSM4-202ENST00000593564 CCR7P32248 378 aa23■■□□□ 1.27
LSM4-202ENST00000593564 CSE1LP55060 971 aaKnown RBP23■■□□□ 1.27
LSM4-202ENST00000593564 FOXL2P58012 376 aa23■■□□□ 1.27
LSM4-202ENST00000593564 HSPA14Q0VDF9 509 aa23■■□□□ 1.27
LSM4-202ENST00000593564 PPP1R21Q6ZMI0 780 aa23■■□□□ 1.27
LSM4-202ENST00000593564 ZNF534Q76KX8 674 aa23■■□□□ 1.27
LSM4-202ENST00000593564 LURAP1LQ8IV03 231 aa23■■□□□ 1.27
LSM4-202ENST00000593564 FAM20CQ8IXL6 584 aa23■■□□□ 1.27
LSM4-202ENST00000593564 LINC01555Q8NAE3 123 aa23■■□□□ 1.27
LSM4-202ENST00000593564 OR4L1Q8NH43 312 aa23■■□□□ 1.27
LSM4-202ENST00000593564 ASZ1Q8WWH4 475 aa23■■□□□ 1.27
LSM4-202ENST00000593564 ATG4AQ8WYN0 398 aa23■■□□□ 1.27
LSM4-202ENST00000593564 TM9SF4Q92544 642 aa23■■□□□ 1.27
LSM4-202ENST00000593564 DLG3Q92796 817 aa23■■□□□ 1.27
LSM4-202ENST00000593564 NACC2Q96BF6 587 aa23■■□□□ 1.27
LSM4-202ENST00000593564 SLC22A18Q96BI1 424 aa23■■□□□ 1.27
LSM4-202ENST00000593564 HES6Q96HZ4 224 aa23■■□□□ 1.27
LSM4-202ENST00000593564 TSSK1BQ9BXA7 367 aa23■■□□□ 1.27
LSM4-202ENST00000593564 SLC22A11Q9NSA0 550 aa23■■□□□ 1.27
LSM4-202ENST00000593564 SNRNP200O75643 2136 aaKnown RBP23■■□□□ 1.27
LSM4-202ENST00000593564 RPN2P04844 631 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 FDFT1P37268 417 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 KIF5AQ12840 1032 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 OASLQ15646 514 aaKnown RBP22.99■■□□□ 1.27
LSM4-202ENST00000593564 CYP2A13Q16696 494 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 VRK3Q8IV63 474 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 MCATQ8IVS2 390 aaKnown RBP22.99■■□□□ 1.27
LSM4-202ENST00000593564 DCUN1D3Q8IWE4 304 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 PRR7Q8TB68 274 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 DENND1AQ8TEH3 1009 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 PEX13Q92968 403 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 FKBP10Q96AY3 582 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 ZNF778Q96MU6 729 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 CARD6Q9BX69 1037 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 ASF1BQ9NVP2 202 aa22.99■■□□□ 1.27
LSM4-202ENST00000593564 CCDC88CQ9P219 2028 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 AGPSO00116 658 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 LIASO43766 372 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 ONECUT2O95948 504 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 S1PR4O95977 384 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 CD9P21926 228 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 PPARGP37231 505 aaPredicted RBP22.98■■□□□ 1.27
LSM4-202ENST00000593564 GRIA1P42261 906 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 ARSFP54793 590 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 GRB7Q14451 532 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 NR6A1Q15406 480 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 FASTKD1Q53R41 847 aaKnown RBP22.98■■□□□ 1.27
LSM4-202ENST00000593564 UNC5DQ6UXZ4 953 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 NLRP9Q7RTR0 991 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 TMEM151BQ8IW70 566 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 TXLNBQ8N3L3 684 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 CISD2Q8N5K1 135 aaKnown RBP22.98■■□□□ 1.27
LSM4-202ENST00000593564 OR6P1Q8NGX9 317 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 LKAAEAR1Q8TD35 194 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 BAG1Q99933 345 aaPredicted RBP22.98■■□□□ 1.27
LSM4-202ENST00000593564 FRMD8P1Q9BZ68 369 aaPredicted RBP22.98■■□□□ 1.27
LSM4-202ENST00000593564 ILKAPQ9H0C8 392 aaPredicted RBP22.98■■□□□ 1.27
LSM4-202ENST00000593564 ATP13A2Q9NQ11 1180 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 KLHL20Q9Y2M5 609 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 TCAF1Q9Y4C2 921 aa22.98■■□□□ 1.27
LSM4-202ENST00000593564 ANKRD12Q6UB98 2062 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 A0A1B0GX78 115 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 CBX6O95503 412 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 ITGAXP20702 1163 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 ALAS2P22557 587 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 PRAMEP78395 509 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 AIMP2Q13155 320 aaKnown RBP22.97■■□□□ 1.27
LSM4-202ENST00000593564 SEMA3AQ14563 771 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 CRB2Q5IJ48 1285 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 AARS2Q5JTZ9 985 aaKnown RBP22.97■■□□□ 1.27
LSM4-202ENST00000593564 TTLL10Q6ZVT0 673 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 ZADH2Q8N4Q0 377 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 WDR54Q9H977 334 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 ENAMQ9NRM1 1142 aa22.97■■□□□ 1.27
LSM4-202ENST00000593564 INTS7Q9NVH2 962 aaKnown RBP22.97■■□□□ 1.27
LSM4-202ENST00000593564 A0A0U1RQJ8 604 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 IQCF5A8MTL0 148 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 E7EVH7 732 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 MASP2O00187 686 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 SLCO2B1O94956 709 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 IFNB1P01574 187 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 ALBP02768 609 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 APOA4P06727 396 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 MMP11P24347 488 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 AOAHP28039 575 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 YOD1Q5VVQ6 348 aaPredicted RBP22.96■■□□□ 1.27
LSM4-202ENST00000593564 Q6ZS92 163 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 OVCH1Q7RTY7 1134 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 TMEM139Q8IV31 216 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 C2orf73Q8N5S3 287 aaPredicted RBP22.96■■□□□ 1.27
LSM4-202ENST00000593564 OR2L8Q8NGY9 312 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 CFAP61Q8NHU2 1237 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 INPP5DQ92835 1189 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 IL17FQ96PD4 163 aa22.96■■□□□ 1.27
LSM4-202ENST00000593564 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.96■■□□□ 1.27
LSM4-202ENST00000593564 A1L4Q6 167 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 WIPF3A6NGB9 483 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 RASGRF2O14827 1237 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 PIM1P11309 404 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms