RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
H3F3B-213ENST00000593254 MR1Q95460 341 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 MENTQ9BUN1 341 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 TRIM55Q9BYV6 548 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 KLHL25Q9H0H3 589 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 P2RY12Q9H244 342 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 CHST8Q9H2A9 424 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 MLXIPLQ9NP71 852 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 PCMTD2Q9NV79 361 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 SERTAD3Q9UJW9 196 aa12.74□□□□□ -0.37
H3F3B-213ENST00000593254 DIDO1Q9BTC0 2240 aaKnown RBP12.74□□□□□ -0.37
H3F3B-213ENST00000593254 TACC2O95359 2948 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 A0A0J9YY10 115 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 TCRBV7S3A2A0A539 114 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 H3BMH7 237 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 SLCO2B1O94956 709 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 APOA4P06727 396 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 CYP2A7P20853 494 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 RPS3P23396 243 aaKnown RBP eCLIP12.73□□□□□ -0.374e-10■■□□□ 14
H3F3B-213ENST00000593254 ELAVL4P26378 380 aaKnown RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 MGAT1P26572 445 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 PEBP1P30086 187 aaKnown RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 PKLRP30613 574 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 MAGEA6P43360 314 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 GABRA4P48169 554 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 RAB28P51157 221 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 ITGA1P56199 1179 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 RIPPLY3P57055 190 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 IL10RAQ13651 578 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 ZIC1Q15915 447 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 KCTD19Q17RG1 926 aaPredicted RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 NADK2Q4G0N4 442 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 PAPD7Q5XG87 772 aaKnown RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 LCN10Q6JVE6 187 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 UNC5DQ6UXZ4 953 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 HOOK3Q86VS8 718 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 LRRC6Q86X45 466 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 SYTL1Q8IYJ3 562 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 RASGEF1CQ8N431 466 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 CLIP3Q96DZ5 547 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 MFSD3Q96ES6 412 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 TCTN2Q96GX1 697 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 ACTR5Q9H9F9 607 aaPredicted RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 FAM60AQ9NP50 221 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 GNPTGQ9UJJ9 305 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 TTC7AQ9ULT0 858 aaPredicted RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 PLAGL1Q9UM63 463 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 SOX13Q9UN79 622 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 SRPK3Q9UPE1 567 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 FARSAQ9Y285 508 aaKnown RBP12.73□□□□□ -0.37
H3F3B-213ENST00000593254 JRKLQ9Y4A0 524 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
H3F3B-213ENST00000593254 E7EQ34 232 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 KRT38O76015 456 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 VAPBO95292 243 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 LDLRP01130 860 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 RPN2P04844 631 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 CAPN1P07384 714 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 RAB40ALP0C0E4 278 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 MRPL49Q13405 166 aaKnown RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 GRB7Q14451 532 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 KIR2DS3Q14952 304 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 TMED2Q15363 201 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 TRIP13Q15645 432 aaPredicted RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 KYNUQ16719 465 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 SLC5A12Q1EHB4 618 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 ZNF385CQ66K41 422 aaPredicted RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 PTRHD1Q6GMV3 140 aaKnown RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 TTC27Q6P3X3 843 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 FAM198BQ6UWH4 519 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 DCUN1D3Q8IWE4 304 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 GPR135Q8IZ08 494 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 ENDOVQ8N8Q3 282 aaKnown RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 LINC01555Q8NAE3 123 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 THAP4Q8WY91 577 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 PANX3Q96QZ0 392 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 DPH2Q9BQC3 489 aaPredicted RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 NLNQ9BYT8 704 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 ERRFI1Q9UJM3 462 aaPredicted RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 PCDHGA9Q9Y5G4 932 aaKnown RBP12.72□□□□□ -0.37
H3F3B-213ENST00000593254 NF1P21359 2839 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 HIVEP1P15822 2718 aa12.72□□□□□ -0.37
H3F3B-213ENST00000593254 ISM1B1AKI9 464 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 KPNA5O15131 536 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 ZNF749O43361 778 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 HCRTR1O43613 425 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 NDUFS3O75489 264 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 KRT14P02533 472 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 HBQ1P09105 142 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 VPS41P49754 854 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 PGDP52209 483 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.37
H3F3B-213ENST00000593254 GPS1Q13098 491 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms