RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 XKR8Q9H6D3 395 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SH2D4AQ9H788 454 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 KAT14Q9H8E8 782 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ZNF556Q9HAH1 456 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 EBF2Q9HAK2 575 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 C12orf10Q9HB07 376 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 EIF2B3Q9NR50 452 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 PLSCR4Q9NRQ2 329 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 BLOC1S4Q9NUP1 217 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 DDX18Q9NVP1 670 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 ZNF446Q9NWS9 450 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 COX16Q9P0S2 106 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 NFKBIL1Q9UBC1 381 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 PTBP2Q9UKA9 531 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 PADI1Q9ULC6 663 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 DDX19BQ9UMR2 479 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 EXOC7Q9UPT5 735 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 MTMR6Q9Y217 621 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ZNF510Q9Y2H8 683 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 AMDHD2Q9Y303 409 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 LYVE1Q9Y5Y7 322 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 BZW2Q9Y6E2 419 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 AP1M2Q9Y6Q5 423 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 TTC21BQ7Z4L5 1316 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 KTN1Q86UP2 1357 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 CTTNBP2Q8WZ74 1663 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 IGHV4OR15-8A0A075B7B6 117 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 LOC100653049A0A140TA62 436 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 MAGEB16A2A368 324 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 SNTNA6NMZ2 147 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 A8MZ25 164 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 MYO1GB0I1T2 1018 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 E2F3O00716 465 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 SCAMP1O15126 338 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 RIPK2O43353 540 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 TXNL1O43396 289 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 BUB1O43683 1085 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 FLOT1O75955 427 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 KRT34O76011 436 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ICAM1P05362 532 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 UBTFL6P0CB48 400 aaPredicted RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 CALM1P0DP23 149 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 CALM2P0DP24 149 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 CALM3P0DP25 149 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 PRKAR1AP10644 381 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ACTN1P12814 892 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 KRT5P13647 590 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ITGA2P17301 1181 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 HLA-DPA1P20036 260 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 HADHAP40939 763 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 HNF4AP41235 474 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ACADSBP45954 432 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 HAAOP46952 286 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 FASLGP48023 281 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 NR2C2P49116 596 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 GDI2P50395 445 aaKnown RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 GPC3P51654 580 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 THOP1P52888 689 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 RAB14P61106 215 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ISL1P61371 349 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 VBP1P61758 197 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 CSNK2BP67870 215 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 NOP14P78316 857 aaKnown RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 MRPS34P82930 218 aaKnown RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 RPL36AP83881 106 aaKnown RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 ILF3Q12906 894 aaKnown RBP eCLIP3.37□□□□□ -1.87
VMP1-212ENST00000591782 DNAJC3Q13217 504 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 MAD2L1Q13257 205 aaPredicted RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 BTG3Q14201 252 aaPredicted RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 SPCS2Q15005 226 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 DECR1Q16698 335 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ZSCAN23Q3MJ62 389 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ZNF805Q5CZA5 627 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 KRBOX4Q5JUW0 171 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 WLSQ5T9L3 541 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 ZNF658Q5TYW1 1059 aaPredicted RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 TATDN1Q6P1N9 297 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 SHQ1Q6PI26 577 aaKnown RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 BRAT1Q6PJG6 821 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 SARM1Q6SZW1 724 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 GFRALQ6UXV0 394 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 CLEC17AQ6ZS10 378 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 RGS9BPQ6ZS82 235 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 MFSD6Q6ZSS7 791 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 BHLHA9Q7RTU4 235 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 GALNTL5Q7Z4T8 443 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 AKAP14Q86UN6 197 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 RNF113BQ8IZP6 322 aaKnown RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 HJURPQ8NCD3 748 aaPredicted RBP3.37□□□□□ -1.87
VMP1-212ENST00000591782 ZNF540Q8NDQ6 660 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 OR6C4Q8NGE1 309 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 OR1J2Q8NGS2 313 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 OR8K5Q8NH50 307 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 OR5R1Q8NH85 324 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 BBS10Q8TAM1 723 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 GRK7Q8WTQ7 553 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 SEPT1Q8WYJ6 367 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 SHC3Q92529 594 aa3.37□□□□□ -1.87
VMP1-212ENST00000591782 TAAR8Q969N4 342 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms