RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, human

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-205	ENST00000590000	ARMC6	Q6NXE6	501 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	MRPL14	Q6P1L8	145 aa	Known RBP	13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	IGFL3	Q6UXB1	125 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000		Q6ZS92	163 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	PIANP	Q8IYJ0	282 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	NXPE1	Q8N323	547 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	GALNT16	Q8N428	558 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	DTWD1	Q8N5C7	304 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	CLDN19	Q8N6F1	224 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	HDAC10	Q969S8	669 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	ULK4	Q96C45	1275 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	OR2A14	Q96R47	310 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	TFB2M	Q9H5Q4	396 aa	Known RBP	13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	ACTR10	Q9NZ32	417 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	SNX12	Q9UMY4	172 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	B3GNT3	Q9Y2A9	372 aa		13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	PTRH2	Q9Y3E5	179 aa	Known RBP	13.64	□□□□□ -0.23
SAFB2-205	ENST00000590000	TRBV5-4	A0A0C4DH59	114 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	ANKUB1	A6NFN9	424 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	PGRMC1	O00264	195 aa	Known RBP	13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	UGT2B7	P16662	529 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	ADRA1D	P25100	572 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	MSN	P26038	577 aa	Known RBP	13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	NDUFS1	P28331	727 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	CACNG1	Q06432	222 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	GPS1	Q13098	491 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	GPR33	Q49SQ1	333 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	MLIP	Q5VWP3	458 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	NAPRT	Q6XQN6	538 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	IQCK	Q8N0W5	287 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	OR5AR1	Q8NGP9	310 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	OR13J1	Q8NGT2	312 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	ACTRT1	Q8TDG2	376 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	COPS8	Q99627	209 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	CHRAC1	Q9NRG0	131 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	P4HTM	Q9NXG6	502 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	ZDHHC3	Q9NYG2	299 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	C5AR2	Q9P296	337 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	SLC5A6	Q9Y289	635 aa		13.63	□□□□□ -0.23
SAFB2-205	ENST00000590000	HEATR9	A2RTY3	570 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000		E7EQ34	232 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000		H7C0S8	307 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	AVIL	O75366	819 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	GOT2	P00505	430 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	ATP1B2	P14415	290 aa	Predicted RBP	13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	PSMA3	P25788	255 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	ACRV1	P26436	265 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	MGAT1	P26572	445 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	ACADL	P28330	430 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	PRKAA1	Q13131	559 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	DBN1	Q16643	649 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	HIF1A	Q16665	826 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	PCID2	Q5JVF3	399 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	ANKRD22	Q5VYY1	191 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	RHBDD2	Q6NTF9	364 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	CCDC137	Q6PK04	289 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	SPESP1	Q6UW49	350 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	CES3	Q6UWW8	571 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	C4orf22	Q6V702	233 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	UNC5A	Q6ZN44	842 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	COX15	Q7KZN9	410 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	AMIGO1	Q86WK6	493 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	HPS6	Q86YV9	775 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	SRRM1	Q8IYB3	904 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	C19orf47	Q8N9M1	422 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	OR6P1	Q8NGX9	317 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	SGSM3	Q96HU1	749 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	CAPZA3	Q96KX2	299 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	NAP1L3	Q99457	506 aa	Predicted RBP	13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	SLC29A3	Q9BZD2	475 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	SYTL2	Q9HCH5	934 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	PLAGL1	Q9UM63	463 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	KLHL20	Q9Y2M5	609 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	TCAF1	Q9Y4C2	921 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	COLEC10	Q9Y6Z7	277 aa		13.62	□□□□□ -0.23
SAFB2-205	ENST00000590000	F8	P00451	2351 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	C17orf113	A0A1B0GUU1	675 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	OR1I1	O60431	355 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	MED26	O95402	600 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	RALB	P11234	206 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	NMBR	P28336	390 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	TNFRSF8	P28908	595 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	FOXN2	P32314	431 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	NPY2R	P49146	381 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	RRAD	P55042	308 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	SOX8	P57073	446 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	SSPN	Q14714	243 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	CYP1B1	Q16678	543 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	LDB1	Q86U70	411 aa	Predicted RBP	13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	KCNMB4	Q86W47	210 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	RAB43	Q86YS6	212 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	DNAJC22	Q8N4W6	341 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	ZNF655	Q8N720	491 aa	Predicted RBP	13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	PPHLN1	Q8NEY8	458 aa	Known RBP	13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	OR2Y1	Q8NGV0	311 aa		13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	TFG	Q92734	400 aa	Predicted RBP	13.61	□□□□□ -0.23
SAFB2-205	ENST00000590000	C5orf34	Q96MH7	638 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms