RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MRPL46Q9H2W6 279 aaKnown RBP13.21□□□□□ -0.29
VMP1-210ENST00000589823 LRRN3Q9H3W5 708 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 MKS1Q9NXB0 559 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 CD274Q9NZQ7 290 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 GRID1Q9ULK0 1009 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 PCDHGA1Q9Y5H4 931 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 PIPSLA2A3N6 862 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 KRT87PA6NCN2 255 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 NCF1BA6NI72 391 aaPredicted RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 NCF1CA8MVU1 366 aaPredicted RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 SASH3O75995 380 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 SLC16A8O95907 504 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 TPBGLP0DKB5 382 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 CDK4P11802 303 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 NCF1P14598 390 aaPredicted RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 HNMTP50135 292 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 CCL7P80098 99 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 SIM1P81133 766 aaPredicted RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 CYP2A13Q16696 494 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 TNFAIP8L3Q5GJ75 292 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 CDKL4Q5MAI5 379 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 NKAIN2Q5VXU1 208 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 C16orf46Q6P387 395 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 MBOAT1Q6ZNC8 495 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 EXOC3L1Q86VI1 746 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 BANPQ8N9N5 519 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 DENND1AQ8TEH3 1009 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 FBXL8Q96CD0 374 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 APOPT1Q96IL0 206 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 GFM1Q96RP9 751 aaKnown RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 ATOH8Q96SQ7 321 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 DPYSL5Q9BPU6 564 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 MENTQ9BUN1 341 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 ZNF446Q9NWS9 450 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 HRASLS2Q9NWW9 162 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 NUDT4Q9NZJ9 180 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 TMEM216Q9P0N5 145 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 STOX2Q9P2F5 926 aaPredicted RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 XPR1Q9UBH6 696 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 APOBEC2Q9Y235 224 aaKnown RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 ENTPD2Q9Y5L3 495 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 ACTL7BQ9Y614 415 aa13.2□□□□□ -0.3
VMP1-210ENST00000589823 PTPRZ1P23471 2315 aaPredicted RBP13.2□□□□□ -0.3
VMP1-210ENST00000589823 GOLGA4Q13439 2230 aaKnown RBP13.19□□□□□ -0.3
VMP1-210ENST00000589823 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 GSAPA4D1B5 854 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 OR5K3A6NET4 321 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 UBXN8O00124 270 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 MATN2O00339 956 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 SMIM24O75264 130 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 SPAG7O75391 227 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 CHRM5P08912 532 aaPredicted RBP13.19□□□□□ -0.3
VMP1-210ENST00000589823 ERGP11308 486 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 GFAPP14136 432 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 POLR2CP19387 275 aaPredicted RBP13.19□□□□□ -0.3
VMP1-210ENST00000589823 TAC1P20366 129 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 CD1CP29017 333 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 IMPA1P29218 277 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 CAPZBP47756 277 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 KCNC1P48547 511 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 TSTA3Q13630 321 aaPredicted RBP13.19□□□□□ -0.3
VMP1-210ENST00000589823 SPIDRQ14159 915 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 KIR2DS3Q14952 304 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
VMP1-210ENST00000589823 CCDC153Q494R4 210 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 AGBL2Q5U5Z8 902 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 SULT1C3Q6IMI6 304 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 AGTRAPQ6RW13 159 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 USP53Q70EK8 1073 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 PLXDC1Q8IUK5 500 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 C2orf73Q8N5S3 287 aaPredicted RBP13.19□□□□□ -0.3
VMP1-210ENST00000589823 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 HMGCLL1Q8TB92 370 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 ZNF480Q8WV37 535 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 SMPDL3AQ92484 453 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 RSC1A1Q92681 617 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 SLC22A18Q96BI1 424 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 ZDHHC12Q96GR4 267 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 NRTNQ99748 197 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 WWOXQ9NZC7 414 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 OGFRQ9NZT2 677 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 CPSF2Q9P2I0 782 aaKnown RBP13.19□□□□□ -0.3
VMP1-210ENST00000589823 TMCO1Q9UM00 188 aa13.19□□□□□ -0.3
VMP1-210ENST00000589823 ISM1B1AKI9 464 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 TK2O00142 265 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 BTN3A3O00478 584 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 KCNK5O95279 499 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 CPNE6O95741 557 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 FTH1P19P0C7X4 201 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 KCNA4P22459 653 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 CCND1P24385 295 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 RPA3P35244 121 aaPredicted RBP13.18□□□□□ -0.3
VMP1-210ENST00000589823 SQSTM1Q13501 440 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 NAE1Q13564 534 aa13.18□□□□□ -0.3
VMP1-210ENST00000589823 FASTKQ14296 549 aaKnown RBP13.18□□□□□ -0.3
VMP1-210ENST00000589823 THEMIS2Q5TEJ8 643 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms