RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CCDC3Q9BQI4 270 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 TBC1D10AQ9BXI6 508 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 UNKQ9C0B0 810 aaKnown RBP11.8□□□□□ -0.52
DNMT1-218ENST00000589294 TWSG1Q9GZX9 223 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 ABCG4Q9H172 646 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 ZNF358Q9NW07 568 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 HRASLS2Q9NWW9 162 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 TMEM216Q9P0N5 145 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 EPHA6Q9UF33 1036 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 ICKQ9UPZ9 632 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 PLLPQ9Y342 182 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 ENTPD2Q9Y5L3 495 aa11.8□□□□□ -0.52
DNMT1-218ENST00000589294 OR6C74A6NCV1 312 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 TARM1B6A8C7 271 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 TYROBPO43914 113 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 S100BP04271 92 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 CCND1P24385 295 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 GGT5P36269 586 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 PRKAA1Q13131 559 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 KIR2DS3Q14952 304 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 N4BP2L1Q5TBK1 243 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 ARMC6Q6NXE6 501 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 WDR74Q6RFH5 385 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 AGTRAPQ6RW13 159 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 ALYREFQ86V81 257 aaKnown RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 ZNF761Q86XN6 746 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 PLXDC1Q8IUK5 500 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 ADGRF3Q8IZF5 1079 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 PDPRQ8NCN5 879 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 DEFB124Q8NES8 71 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 DENND1AQ8TEH3 1009 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 ZNF480Q8WV37 535 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 SMPDL3AQ92484 453 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 RHBDF1Q96CC6 855 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 APOPT1Q96IL0 206 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 IQCGQ9H095 443 aaKnown RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 LRRN3Q9H3W5 708 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 XKR8Q9H6D3 395 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 CNOT10Q9H9A5 744 aaKnown RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 UTP6Q9NYH9 597 aaKnown RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 NUDT4Q9NZJ9 180 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 CD274Q9NZQ7 290 aa11.79□□□□□ -0.52
DNMT1-218ENST00000589294 STOX2Q9P2F5 926 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 PTBP2Q9UKA9 531 aaKnown RBP11.79□□□□□ -0.52
DNMT1-218ENST00000589294 ASXL3Q9C0F0 2248 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 OR5K3A6NET4 321 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 E7ENX8 843 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 BTN3A3O00478 584 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 PRPF4O43172 522 aaKnown RBP eCLIP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 DUX1O43812 170 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 KLK8O60259 260 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 SMIM24O75264 130 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 IPO13O94829 963 aaKnown RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 CPNE6O95741 557 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 GUCA1CO95843 209 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 TOP3BO95985 862 aaKnown RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 CHRM5P08912 532 aaPredicted RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 MTHFD2P13995 350 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 CREB1P16220 341 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 TYRP1P17643 537 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 TAC1P20366 129 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 IMPA1P29218 277 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 SLC18A1P54219 525 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 MAGOHP61326 146 aaKnown RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 CCL7P80098 99 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 TAP2Q03519 686 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 RSPO4Q2I0M5 234 aaPredicted RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 METTL2BQ6P1Q9 378 aaKnown RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 C16orf46Q6P387 395 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 CDHR3Q6ZTQ4 885 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 OOSP2Q86WS3 158 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 SYTL1Q8IYJ3 562 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 LINC01555Q8NAE3 123 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 OR56A3Q8NH54 315 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 RDH11Q8TC12 318 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 NCSTNQ92542 709 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 ARL8AQ96BM9 186 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 ZBTB9Q96C00 473 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 ZDHHC12Q96GR4 267 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 ATP6V1G3Q96LB4 118 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 EGFL8Q99944 293 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 PCBD2Q9H0N5 130 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 OGFRQ9NZT2 677 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 CPSF2Q9P2I0 782 aaKnown RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 XPR1Q9UBH6 696 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 PLAGL1Q9UM63 463 aa11.78□□□□□ -0.52
DNMT1-218ENST00000589294 APOBEC2Q9Y235 224 aaKnown RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 TNPO3Q9Y5L0 923 aaKnown RBP11.78□□□□□ -0.52
DNMT1-218ENST00000589294 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.52
DNMT1-218ENST00000589294 A0A1W2PQM1 296 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 PIPSLA2A3N6 862 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 C2orf74A8MZ97 194 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 HMGB1P1B2RPK0 211 aaPredicted RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 SUPT3HB4E1H0 165 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 UBXN8O00124 270 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 NTN3O00634 580 aaPredicted RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 TM9SF1O15321 606 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 PRICKLE3O43900 615 aaPredicted RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 PLIN3O60664 434 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms